UFO06095.5prime Sequence
1053 bp (950 high quality bases) assembled on 2009-07-27
> UFO06095.5prime
CAGTCGACATGGGTACTGCCACTCAGTTTATTGTTGGTTTCATCGGCGCC
CTGGGCGCCTTTTGTCTAGGCGCAGTGATCGGCTGGTCAGGACCGGTGGA
AAATGAAGTCAAGAATTCTAACGCGTACAACTTTACCCCTCGTCAAACGG
AATGGGGCCTGGTGGGATCTCTGATGACTCTGGGTGCAGCTTTCTCGTGC
ATTCCGGTGGGCGTGCTCATTGGTAAGATCGGGCGGAAGACGACAATGCT
AATCCTGCTGCCACCGTTCTTTATCGGATGGCTCCTGATCCTCCTGGCAT
CGCACATAGCAATGCTGCTGCTCGGACGCTTCGTAGTGGGATTCTGCGGA
GGAGCCTTCTGCGTGACTTGTCCCATGTACGTGACTGAGATAGCCCAGGT
CCAGTACCGCGGAACCATGGGATGCTTCTTCCAGCTGCTAATCGTTTTTG
GTATTCTGTACGCCTTTGTGGTTGGAGGTTTTGTAAAGACCTTCTACTTT
AATATTGCTTGCGCAATTTTGCCCGTAATCTTTTTTGTCTTGATGATTTT
TATGCCGGAATCTCCGATTTTTCTGGCCCAAAAGGGAAAAGCCGAGAAGG
CGGAGAAATCTCTTATATTTCTGCGCGGAAAGGATGCGGATGTGAGCGGT
GAGCTGAAGGAAATGAGCGCCGAGGGCCAAAAGGAGAAGGCTAGCGTTGG
GAAAATCCTATGCCGCAGGATTACCCTCAAGGGGCTGTTCCTCTCCATCG
GTCTCATGTTGTTCCAGCAGATGACGGGCATCAATGCGATTATTTTCTAT
TCTACATTCATCTTTGAGACGGCTGGATCGACCCTGGAGCCCAGAATATC
TACAATTATTGTGGCATTGTGCAGGCTATTGCCACTATCATTTCGATCCT
GCTATGAGAAGTCGGTCGGAAGATACTCCTATGCTGTCGCTGCATGATGG
GTATCAGCACCTGATCATGCTCTTTACTTTGGCATGATGATGAATCTGAG
TCGCTGCTGCCCTACTGCCGTTGTGTTTTTATTATGATCTCCTGGATTCG
GTT
UFO06095.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sut4-RA | 1686 | CG1380-RA | 165..1207 | 9..1035 | 4725 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10085969..10086963 | 994..9 | 4490 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:56:51 has no hits.
UFO06095.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:30:11 Download gff for
UFO06095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sut4-RA | 96..1166 | 3..1052 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:56:33 Download gff for
UFO06095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sut4-RA | 159..1229 | 3..1052 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:44 Download gff for
UFO06095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sut4-RA | 159..1229 | 3..1052 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:44 Download gff for
UFO06095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10085899..10086969 | 3..1052 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:56:33 Download gff for
UFO06095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5973404..5974474 | 3..1052 | 97 | | Minus |
