UFO06115.5prime Sequence
1096 bp (1009 high quality bases) assembled on 2009-08-08
> UFO06115.5prime
CAGTCGACATGCCAAAAGAAGATTGCAAATACTGGGATAAGTGCTATCAG
CAGAATCCCGCACATTTGTCCAAATACAATCATCCGAAAAAGCAACAAGA
ACACGAAGTGGACGGCGCAGAAGGCAAAAAAGTGGCGCCAAAAAGAAGTG
CATCCTCGCAGTCTGGTGAACAGAAAAAGGAAGAACAAACGGAGCCGGTG
AACAAGGATAAGTCCAATACGAGTGCTTCAAGTACGGAGATGGTGAACAA
GGATACAGCCAAGGGCAGTTATGAAGCCGAAACCGAGGAGCTTCACAAAG
AGGCCATGAGCAACATATCCGGAAAGAACTACATGGAGATCTTGGAGAAG
CGCATCCGCCTGTCCGTGCAGAAGGAGTACGACAATCTCTGCGAGTCCAA
CGAGTTCATTCGACACAAGTTCCTTGTCGAAATGCCGCCGGACTTCTACG
AATTTTGGAAGTTTGTGGGAAGCTTAAAAATTGATCCTGCGAAGCCCAAG
GATGCTGGCTTGGAGCACCTAGACAAAGTATTTCAACTGCAGTTGGTGGG
TCCCTTTGAGTTCCTAGCCGGTAAATTTCACGGCGCCAAACTAGGCGAAC
CGGGAGACTACCTGCGCCACTGGCGTTTTTACTACGATCCACCAGAATTT
CAGACGATCTTCGTGCGCCGAGGCACTGGGATTCACTACGGTTACTGGCG
CGATGTGCCGCAGGACAAGGAAAATCTCTTAATAGCCCGCAACGACTCTG
CGAAAGGCTGCCAGTTCCAATTCGTCGCTGGAAATGCCTTCGATGCTTTC
CTCTACTACCTGGAGCACGATTTTGCGGCCACTCCGTTCTCATGCGGGCA
GTTGGCGGGGACCAAAAAGGCGGTGGCAAATACCTGAGTGACAATTCCCT
AGAACTGGCCCAGCTGGACCGACTGCAGCGGGAGCGCAACAAGCGTGTGT
GCCAGACATTCCACCGAGCCGGCATTGTGTGCCCTTTGACAGAAGACAGA
AGTGGGATACGCCGCTGCTGTCAGCGATTCGACTCAGAGATGCTGCATGC
TGACGAGACGTCGATATGAACGCAGCAGCGTCTGGAAAGCTCACGT
UFO06115.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:06:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1218-RA | 1505 | CG1218-RA | 95..1125 | 9..1030 | 4930 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:06:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5791973..5792980 | 9..1010 | 4765 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:06:51 has no hits.
UFO06115.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:36:56 Download gff for
UFO06115.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1218-RA | 86..1137 | 6..1045 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:38 Download gff for
UFO06115.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1218-RA | 93..1144 | 6..1045 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:04 Download gff for
UFO06115.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1218-RA | 93..1144 | 6..1045 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:04 Download gff for
UFO06115.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5791971..5793022 | 6..1045 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:38 Download gff for
UFO06115.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1617693..1618744 | 6..1045 | 98 | | Plus |
