UFO06121.5prime Sequence
1099 bp (990 high quality bases) assembled on 2009-08-08
> UFO06121.5prime
CAGTCGACATGACCCAATATCTGCCGCCGAATCTGCTGGCGCTGTTCGCG
GCACGGGAGCCCATCCCGTTCATGCCGCCGGTGGACAAGCTGCCGCACGA
GAAGAAGTCTCGCGGCTACCTGGGAGTGGCCAAGTTCATGGCCGATTTCG
AGGATCCCAAGGACACGCCGCTGCCGAAAACGGTGGAAACGCGTCAGGAG
CGGCTGGAGCGACGCCGGCGCGAGAAGGCCGAGCAAGTGGCCTACAAGCT
GGAGCGTGAGATAGCGCTGTGGGACCCCACAGAGATCAAAAATGCCACGG
AGGACCCGTTTCGCACGCTGTTCATTGCACGCATCAACTACGACACGTCC
GAGTCGAAGCTGCGGCGTGAGTTCGAGTTCTACGGGCCCATCAAGAAGAT
CGTCCTGATCCACGACCAGGAATCAGGTAAACCCAAGGGCTACGCCTTCA
TCGAGTACGAGCACGAGCGGGACATGCATGCCGCCTACAAGCACGCCGAT
GGTAAGAAGATCGACAGCAAGCGCGTCCTGGTGGACGTGGAGCGGGCTCG
CACGGTCAAGGGCTGGCTGCCCCGACGCCTGGGCGGCGGTCTGGGTGGAA
CGCGCCGCGGCGGCAACGATGTCAACATTAAGCACTCCGGCCGCGAGGAC
AACGAGAGGGAACGCGAGCGCTACCGGCTGGAGCGGGAGCGTGAGGATCG
CGAGGGTCCTGGACGCGGCGGCGGCTCCAATGGCCTGTATGCCCGGCCCG
GACGCGGTTTCGGTGCGGAACGTCGACGTTCCCGCTCCAGGGAACGCCGC
GACCGTGAACGAGATCGCGGACGGGGCGCTGTGGCTAGCAACGGTCGCTC
GCGCAGCCGTTCTCGCGAGCGCAGAAAACGACGAGCGGGCAGCCGGGAGC
GGTACGACGAGTCGACCGCCGCGATCGGCGGGACAGGAGCGCGAGCGTGA
TCGCGATCGCGAGCGTGAGAAGAAAAAAGAGCGCTCCAAGTCTCGCGACG
GCGATCCTCCAGGGAGCGTCCCGACGGAAGCCGAGAGAGAAGGATCGAGA
CGCGGCACGGAATCGGCGCAATGTCAGACGCAAGTCGAATTCATGAATG
UFO06121.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:18:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| snRNP-U1-70K-RC | 2948 | CG8749-RC | 197..1271 | 9..1076 | 5020 | 98.3 | Plus |
| snRNP-U1-70K-RA | 1834 | CG8749-RA | 197..1271 | 9..1076 | 5020 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:18:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6970425..6971462 | 1043..9 | 4875 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:18:50 has no hits.
UFO06121.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:37:07 Download gff for
UFO06121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| snRNP70K-RA | 190..1261 | 1..1068 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:22 Download gff for
UFO06121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| snRNP-U1-70K-RA | 191..1262 | 1..1068 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:37 Download gff for
UFO06121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| snRNP-U1-70K-RA | 191..1262 | 1..1068 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:37 Download gff for
UFO06121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6970397..6971468 | 1..1068 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:22 Download gff for
UFO06121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6970397..6971468 | 1..1068 | 98 | | Minus |
