UFO06123.5prime Sequence
1120 bp (1020 high quality bases) assembled on 2009-08-08
> UFO06123.5prime
CAGTCGACATGTCTATGTCAAAAACGACTAACACCTATAACCGGCAGAAC
TGGGAAGATGCTGAATTCCCAATTCTGTGCCAAACTTGCCTTGGCGACAA
TCCGTACGTGCGGATGATTAAAGAGCGGTTCGGCAAGGAATGCAAGATAT
GCACGCGTCCATTCACAATATTTCGATGGTGTCCTGGTGCTCGTATGCGC
TTCAAAAAGACGGAGATATGTCAAACGTGTGCGCGCCTGAAGAACGTGTG
TCAGACCTGCCTCTTGGACCTGGAGTACGGACTGCCGATTCAAGTACGAG
ATGCGGCGCTCAAAGTGGCTGACAATATGCCACAAAGCGACGTTAACAAG
GAATACTACATCCAAAACATAGACGCCCAGCTGCAGGACGGAGATGGCAC
GGAGGCGGCAGGAGCTGTCGGTCGATCCCTCGCCGCCAACGAGATGTTGT
CCAAGCTTGCGCGCACAGCACCCTATTACAAAAGAAATCGGCCGCACATC
TGCTCCTTTTGGGTTAAGGGCGAGTGCAAGCGTGGAGAGGAGTGCCCATA
CCGCCACGACAAGCCCAACGAGCCGGACGATCCGCTATGTGAGCAAAACA
TCAAGGACAGGTACTACGGACGCAACGATCCTGTGGCCGAGAAGATCATG
AAGCGTGCAGCCTCGCTTCCCACACTCGAGCCGCCGGAGGACCGCAACAT
CACAACTCTCTATGTGGGGAACCTTCCTGAAGAAATCACGGAACCCGAGC
TGCGAGATCAGTTCTACCAGTTCGGCGAAATTCGATCAATTGCGCTGGTG
CCACGCCAGCAGTGCGCTTTTGTGCAATACACCAAAAGAAACGCTGCCGA
GCTGGCTGCTGAGCGGACCTTTAATAAACTGGTGATCCAGGGCCGGAAGT
GAGCATTAAGTGGCTCACTCTCAGCAAAGCAGGCACCGCTGCAAAGACAG
ACAGACGCTTCGACTTGGCCGGCATCCACCGCCTAGCGCGAAGCCCACGA
CTACTTCATCTTCGCCAAGAGCAAATCATGTTCATGGCCCGCCGCATGAA
GCTGCATCGTGCCATCATCTAGTCCGGCGTCGGCTTACAAAGTATGTCAG
CTACTTAGCAGCTCTCTACG
UFO06123.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:07:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14641-RA | 1564 | CG14641-RA | 101..1229 | 9..1120 | 5125 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:07:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4231186..4232242 | 1058..9 | 4830 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:07:26 has no hits.
UFO06123.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:36:51 Download gff for
UFO06123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14641-RA | 114..1236 | 9..1114 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:25 Download gff for
UFO06123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14641-RA | 101..1223 | 9..1114 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:38 Download gff for
UFO06123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14641-RA | 101..1223 | 9..1114 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:38 Download gff for
UFO06123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4231120..4232242 | 9..1114 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:25 Download gff for
UFO06123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 56842..57964 | 9..1114 | 98 | | Minus |
