UFO06128.5prime Sequence
1112 bp (1017 high quality bases) assembled on 2009-08-08
> UFO06128.5prime
CAGTCGACATGCTGGCCAACTCATGCTGCGGTTGGAGAAAATATAAAACC
CATGATCAGCATCATAGAACCCTAAAGAAAAAAACTCGACAGAACACATC
AGATACAACAGTTCACATAGAAGTGAACTCCAACGAAATCCAGTTTCCAG
GTTCTTACAGATTTAATCTTGACTCAAAAAAAATAAATATCGGGCGAATG
AATATTCTTGGACATAAGAGAGGTAATTTCCGTGTAACTCGATATGTCAC
GGTCACCGTACTCTTAATTTTATCGACTGCAGTCAATGCTTATGCTCAGC
CAGAAAATAAAAGCTTCAGTAATTCTTCCAACAACGATAGTCCGGAAATG
GTTATGTTGAGTAACGAAACAAACAATAGTGCAAAAGTACTATCAGAAAA
AAATGGTTCTTCTTCAATATCGGCGGATGATAAAATAAATGAAAATATGG
GAATATTCCAAATGAAAGTACAAAGTAAACCGGGGAAAAAAAGTACCCCT
TTAGCAAAGGTATCAGAGCATGGAGATTTATCAAGAGTTCAAAGTGTATC
TTTGTATCGCAATACCTTAATAAATATAGAAAGTATGCTACAGCGTCAGT
TGCGTGAGAAAGCCAAAGTGGATAGTATAGAATCGATTAAAATGCACATA
CTTATGCGCTTGAATTTAAAAAAACTTCCCAATATAACAAAACCAATTTC
AGTACCACAAAATATAATAGATAACTTTTATAGAGATTATAATGCATCTT
CAAAAACTACTGTTTGGAATCGCATGGAAAGCATTGACGAATCTCATTTG
TCTATAAATGACACTTATGGCGACCACATAATGACTGATTTTTTTGATGA
AAGTTCATCCTCCCAAATGCAGGAGATGATGCTAACACTGTTAATGAATT
TCTGATAGATTTGAATAAAAATCAAGCTAAAAGTCGGACATTCCTATTAT
ACCACGATGAGAGTACGAGAGTATTTTTGTCTCCATCAGCAGTATATACA
TATTTCCGAGGAAATTCAACCTCATGTTCGCACATCGCAGGTCGATGTTT
TCGTTTCATGACGGTAGCTACTCGACTGTCTACGCTACCCTCATTTATTT
ACTGGTGGGATG
UFO06128.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| myo-RD | 3612 | CG1838-RD | 510..1610 | 8..1091 | 5040 | 98.2 | Plus |
| myo-RC | 3056 | CG1838-RC | 869..1969 | 8..1091 | 5040 | 98.2 | Plus |
| myo-RA | 2896 | CG1838-RA | 386..1486 | 8..1091 | 5040 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 693386..694390 | 1007..8 | 4685 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:37:54 has no hits.
UFO06128.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:37:12 Download gff for
UFO06128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myoglianin-RC | 863..1924 | 8..1058 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:34 Download gff for
UFO06128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myo-RA | 386..1447 | 8..1058 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:04 Download gff for
UFO06128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myo-RA | 386..1447 | 8..1058 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:04 Download gff for
UFO06128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 693381..694390 | 8..1011 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:34 Download gff for
UFO06128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 714007..715016 | 8..1011 | 99 | | Minus |
