UFO06136.5prime Sequence
1091 bp (944 high quality bases) assembled on 2009-08-08
> UFO06136.5prime
CAGTCGACATGGCTGGCGGCAACACCCCGCGTGTGATCCAGGTGACCAAC
ATAGCGCCGCAGGCCACCAAGGACCAGATGCAGACGCTGTTCGGGAACAT
TGGCAAGATAGAGGAGATCCGCCTGTACCCGACAATCCGTGATGTCTCCT
GTCCGGTGCAGTCGCGCATCTGCTATGTGAAATACACGGACACGACCAGT
GTGCCGGTGGCCCAGCACTTGACCAACACGGTGTTCATCGATCGCGCCCT
AATTGTCATACCCGTTCTGGCCATACCCGAGGAGTATCGGGCCCTGGAGA
TGCTCAAGAACGGAACCATTGTGCCGGGACTCCAGAAGCCGGACTCCAAG
CTACCGCCCGAAGTCATTAACCGCATCGAGGGACAGCTGCCGCAGCAAGT
GATCAAGACGTACGACCCCAAGTTGGTGGAATTCAATCTGCCGGAGTACC
CGGCCTTACCCTCGTTCTACGATGCGCGCAAAATCGAGGAGATTCGGCGC
ACCATTATCGTGTGCGATGTTAAGAACGAGTGGCGGCTAGACGATCTGAT
GGAATGCTTTCAGCGCGCTGGGGAGGTGAAGTATGCCCGTTGGGCCGAGA
AGGATAACAAGACGTACTGCATGATTGAGTTCTGCGAACAGACCAGCATT
ATTCACGCCCTGCGCATGCAGGGCCAGGAGTTCAAGGGTGGCCATCTAAG
CGTCTACCACTCCACGTATTCCATAACCAACCCGGACCAAAGTCGAATGA
TGCACCGCACGCTGAGATTGAGGAGGCCATGACCATTGTGAAAGAGGCGC
ATAGTATGATCTCAGCGGCCATTGATCCGGTAATTGGGAATGCTCGCTAA
GACAAGCGCCGCATGTCGAGATCACGGTCCCGTTTCCGGGACCGTCGCAC
CAGTCGATCCCGCTCGCATCGTTCCAACATCGAGACGCCGTTCCAGGGCG
TTCCGGTTTCAGAGAAGCGACGTAGTGTGTCCCGATTCACGCCCGCTTCT
AAGTCCGTGCCAGGCACTCGTTCCGGTTCTCCGCAGCAGCGCTCAAAGAT
CACGACTCGTCGCAAGCCTCCCTGCGTCAGTAGATCACGCC
UFO06136.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:16:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Srp54-RA | 2134 | CG4602-RA | 136..1188 | 7..1064 | 4730 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:16:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9913046..9914023 | 7..986 | 4475 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:16:18 has no hits.
UFO06136.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:37:09 Download gff for
UFO06136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Srp54-RA | 133..1138 | 1..1009 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:01:54 Download gff for
UFO06136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Srp54-RA | 129..1134 | 1..1009 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:47:24 Download gff for
UFO06136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Srp54-RA | 129..1134 | 1..1009 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:47:24 Download gff for
UFO06136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9913039..9914044 | 1..1009 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:01:54 Download gff for
UFO06136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9913039..9914044 | 1..1009 | 97 | | Plus |
