UFO06140.5prime Sequence
1133 bp (1035 high quality bases) assembled on 2009-08-08
> UFO06140.5prime
CAGTCGACATGTCCGACGACGACGAGTCGGGTGTCCATCGGCTGGAGGGC
ACCGCTGGCCAGGAGACGCGCGGCGGCCTGGTCATCCGGAAGCCCAAGGA
TGCCGGCGCTGGCGGTGGCGGTGGATTCAAGGTGCCGCAGGGATCGATGT
TGGGCCTGGACAAGCTGGCGGCCAAGCGACGGGCCGAAAAGGAGCGATCC
GAGCGACTGATCTCCTTCAAGGACAGCGAATTCGATGACACCGGCGGCGG
GAGCTCCACGCCGCAGGCCAACGCCTCTGGCGCTTCCAGTGAGTTTGCCT
TCAAGAAACCGGACACCAAGAGCTTCGAAAAGCTGCGCGGCCAGCTGCGC
GAGCACAAAGACGATACACCCTCGCACACCGGCGGCGTTTCCGAGAAGGC
ACGCGAGCGTCTGCGCGAGCACATCCAGCGGGACAGAAAACGTGGCCCAG
TCAGCAGCACAGCGGCAGAGGGCAGGGACAGGGATCGCGACTGGGATCGT
GACCGACGCAGGGACCGGGACAGAGATCGGGATCGTGACCGCGACCGGCG
CCAACACAGAGAAAGGGAGCGCGATCGGCACCGCAGCTGGGATCGGGATC
GTGGTCGTGATCGTGATCGTGATCGCTCCATGTCCGAGCGCAGTGTCCAT
ACGCCGCGTGAGCCGGGAACACCAGGCGGCAGCAGCGGTGGCATATCCAA
TAGCTCGTGGGACGACGAGGACGGCGAGTTTGGACAGCGCAAGTCGGACT
GGGATATGCCAACGCCCAGACGCCATGGCAACAAGTCGGGTGATTGGTCA
GTGCGGAGCGGCGGCAGTCGGCGTAATCACGGACGCCAGGATGACACTGT
CCGGGCCAACGCCAGCGCATCGCTACAATCAGTGGGCACACGGTCGCAAG
CGAAGCGGCGCACGCCATGGGGCGAGGATCCCGATCGCTGGATCTGTGGG
AGAGAGCAGCGTCGCCTCGACGCGAGTGTACACATTGACGAGGGCTACGA
CGATGAGAACATCATCGTGCCCCACTCGAGTACTTTCGCAAGCGCGAGAG
CAGCTGGAGCGAGAGAACAAGAGATCAGGTCAGCAGGGCAGAATACTGAC
ACGAGTGGGGAAGCAATCGATGGCCTCACCTCG
UFO06140.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:45:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(1)G0007-RA | 3880 | CG32604-RA | 102..1209 | 9..1095 | 4955 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:45:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14201463..14202471 | 9..1011 | 4670 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:45:54 has no hits.
UFO06140.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:27:47 Download gff for
UFO06140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0007-RA | 88..1179 | 1..1078 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:23 Download gff for
UFO06140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0007-RA | 98..1189 | 1..1078 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:19 Download gff for
UFO06140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0007-RA | 98..1189 | 1..1078 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:18:19 Download gff for
UFO06140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14201459..14202550 | 1..1078 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:23 Download gff for
UFO06140.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14095492..14096583 | 1..1078 | 97 | | Plus |
