UFO06146.5prime Sequence
1089 bp (1002 high quality bases) assembled on 2009-08-08
> UFO06146.5prime
CAGTCGACATGGCCACCACAGCCGCCGGATCAGCAGCCACCACCACCAAC
ACGATGGTGGTGAAGCGGCCAGGACCACCAGTGCCGCCCAGGCCCAAAGC
AGCAGCTCAGCTGGCCAATGGAGCAGGAGCCCCTCCGATCATTCAGAAGA
AGCCCACCTTCGTGAGCCAGCTGAGTGCAGTGGGTCGTACCTTGGTCTAC
AAGTCGCCAACGGTCAATCTGCCCAAGAAACAGGCCCAGACCCAGACGCC
CACCACGGCGGTGCCAACGCCGCCGGTGAAGCCCCTGAAGCTGCGCAAGG
CACCGGATGTGCCCACGGCCAAGCCCAGGGATTCAATGACCTCGGTGGTC
ACGGTCAACCGGCATAACTCGATAAGCGTGATCGGGAGCACGCCACAGAC
CACACCCCGCAAGGACACCCGCTTGAGCCTGGGAAAGGTGGACTTCGAGA
GGGCGGGCCTCCAGCCGGCCAGTCAGCCACTTCCCAGGCCACGGAAAATT
GTTCAAGTGCCCGTGGCCACTCTAGATGTGGAAGACATACCAGTGGTGGC
TCCCAGCCCATCATCAAATGGACTCTTCAGGCGATCAAAGACCACCCTGG
ATGGCAGCCAGAAGGATTCGGCATCCTCCCCGCACAATGGAGGAGGATTC
CTGTCCGGACGGACCGTGGAGATCAAGAATAATCTGAAGAACGCCGCCGA
GCGTTTGTTCTCGGAGATAATCATCAACCAGAGCCAGAAACAGGCAGCCA
CCGACACCACCATCATAACCAAGCACGAGGCCCTGAAGCAGGAGTCCGAT
GTCCTGCCATCCAGTCATCGGGCAACTGCATGAGGATCAATGTTAACGGC
GGCCAGACGAGCACCATGAAGAGCTCGATCAGCGTGGGCACACGCCGCAA
AAGAAGCAGCCTTCCACGAGATGCTCATCTCGGAGCTGGCTGCATGCGAA
CAAGTCCTGCTCCCTGGAGCAGCTACCCACCGCCAGTCGCCGCCCACCCC
ACCACTCCACGCCCAAAGCGTGCATCTCGCAGGGCTACACTCTTGATGAT
GCCGACCCGAGGATGTGGATGCGACACAGGAGATGCCAT
UFO06146.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31038-RE | 3335 | CG31038-RE | 503..1579 | 9..1073 | 4995 | 98.5 | Plus |
| CG31038-RD | 4246 | CG31038-RD | 1314..2390 | 9..1073 | 4995 | 98.5 | Plus |
| CG31038-RB | 3498 | CG31038-RB | 566..1642 | 9..1073 | 4995 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29878372..29879353 | 9..985 | 4660 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:02:18 has no hits.
UFO06146.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:37:13 Download gff for
UFO06146.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31038-RB | 537..1636 | 1..1087 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:07 Download gff for
UFO06146.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31038-RB | 561..1660 | 1..1087 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:36 Download gff for
UFO06146.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31038-RB | 561..1660 | 1..1087 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:36 Download gff for
UFO06146.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29878367..29879466 | 1..1087 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:07 Download gff for
UFO06146.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25704089..25705188 | 1..1087 | 97 | | Plus |
