UFO06151.5prime Sequence
1105 bp (972 high quality bases) assembled on 2009-08-08
> UFO06151.5prime
CAGTCGACATGAGCTGCTTGGTCGGGAACCGAAAGCGGAACAGCGGCAGC
ACGGCGGACGAATTCGACAAGGTCAGCACTTTGGCCAATGCCGATGATAC
CGAGTGCGTATCGCCGGATCCGGGGCGGGAGCCGGAAAGCAACAAACCGG
ATTCGCAGACGGAGCCTGAGTTTGGCCATTTGAATGAGACGCGGAGGAAG
ATTCTCGATGCCATTGCTGCTTTAAATGATGATAGCTTCGATAAGCGCAT
GGCCCGGTTGCTCATGCAGTACGAGGGCGCCATTCGGGAAGAGTTTCAGC
GGGCACAGTATTTGCCCCAGAAGTGCCGCAAGCTGGCGCGAATCCTAACC
GGCCTCACTGATGTCATCCACACTATGGTTCAGGGTCGAGCGCTGCAGCG
GGACGAGAGCTACAGGCAACGCATGTGCAATATTGTTGGTTTCTACATAT
CCTGCGAACTCTGTTCCGCTCAGGAGCCGGTGGAGAAGGAGGAGACCATC
ATCAACAGGATTAACAGCTGCCTGAAGCTCTACGTGGAGTACGGAGATGG
TGGCGCCGGCGTCCACCGGGAGCACGTGCTGCGCACTCTCCTCGCTGCAC
CCAAGCTCTTCAACAGAGCTAGCATTTTGTCCATGCTGTACAGCCGCCTC
TTTCCCCACTGGTCCGTTCCCAGCGTTATGATACAAGCAGAACTGCCAGA
TAAACTCTACATTGAATACATACTCATATTTTACTACTGGCAGCGTCTGG
AGTCGGATGAGTCAGTCAAGGAGCGCATCGTGCAGTTCGCCGAAAAGTTC
ATGAGCCCTCAAGATCACTGGCCATAAAAAGTGTCTATGCTCATTACTTG
CCAAAGTTTACGGACCAGAATGCCGCCACGCGGACCATATTGAATCATCT
GCGAATGAGCAGTTGCACAAGTTTGCATGTGGTCAGCAAGGTGGACAATC
GACCGCCCAGTCCAACGAATGGTCCTCAGTTCTGATGATGAGACGCTGCC
CGATGTGGGACATATCGGTACGCCGACTCATCATTACATCATCCGCCGTT
TCCTCGATCCTGTCATGCTCGCAGTGGACGGCAGCGGCCACGTTTGTTAA
CGCAT
UFO06151.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:35:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12316-RA | 4329 | CG12316-RA | 465..1514 | 8..1047 | 4995 | 99 | Plus |
CG12316-RB | 3921 | CG12316-RB | 57..1106 | 8..1047 | 4995 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:35:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15135606..15135972 | 643..277 | 1835 | 100 | Minus |
3L | 28110227 | 3L | 15134893..15135223 | 969..641 | 1555 | 99.4 | Minus |
3L | 28110227 | 3L | 15136032..15136301 | 277..8 | 1350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:35:38 has no hits.
UFO06151.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:27:42 Download gff for
UFO06151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12316-RA | 457..1519 | 1..1055 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:32:34 Download gff for
UFO06151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12316-RB | 51..1116 | 1..1055 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:09 Download gff for
UFO06151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12316-RB | 51..1116 | 1..1055 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:09 Download gff for
UFO06151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15135606..15135971 | 278..643 | 100 | <- | Minus |
3L | 15136032..15136304 | 1..277 | 98 | | Minus |
3L | 15134890..15135220 | 644..971 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:32:34 Download gff for
UFO06151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15127990..15128320 | 644..971 | 99 | <- | Minus |
arm_3L | 15128706..15129071 | 278..643 | 100 | <- | Minus |
arm_3L | 15129132..15129404 | 1..277 | 98 | | Minus |