UFO06172.5prime Sequence
1096 bp (969 high quality bases) assembled on 2009-08-08
> UFO06172.5prime
CAGTCGACATGTCCTCGCTCTCTGCGTCCGCGGAGAATGTGTCCAGTTTG
GGACTGGGATCGGGCGGAGGAGGAACTACTTCCCACGACGGCAACTCCCA
GCAGGGTTCCGGATCCGACGGAGGATCCAGTATGTGCCTGGAACTGGCCC
TCGAGGGTGAACGCCTCTGCAAGGCGGGTGACTGCCGGGCGGGCGTGGCC
TTCTTCCAGGCGGCCATTCAGGCCGGAACCGAGGATCTTCGCACTCTGTC
CGCCATCTACTCCCAGCTGGGCAACGCCTACTTCTACCTAGGCGACTACA
ACAAGGCGATGCAGTACCACAAACACGATCTTACGCTGGCCAAGAGCATG
AACGACCGACTGGGCGAGGCCAAGTCCTCTGGCAATCTGGGCAACACCCT
CAAGGTAATGGGTCGCTTCGACGAGGCGGCCATCTGTTGCGAGAGGCACC
TAACGCTGGCCAGGCAGCTGGGAGATCGTCTGTCCGAGGGACGCGCTCTT
TACAACCTAGGAAATGTCTACCACGCCAAGGGCAAGCACTTGGGTCAGAG
AAACCCTGGAAAGTTCGGCGACGATGTCAAGGAGGCGCTCACCCGTGCCG
TGGAGTTTTACCAGGAGAATCTGAAGCTCATGCGGGATCTGGGTGATCGT
GGTGCTCAAGGTCGAGCTTGTGGTAATCTGGGAAATACCTACTACCTACT
AGGCGATTTCCAAGCGGCCATTGAGCATCATCAGGAGCGACTGCGCATTG
CCAGAGAGTTTGGTGATCGCGCGGCTGAGCGAAAGGGCCAACAGTAATCT
TGGCAACTCGCACATATTCCTGGGACAATTCGAGGACGCCGCCGAACACT
ACAAACGCACCTTGGCTTTGGCCGTTGAGTTGGGTGAACGCGAAGTGGAG
GCCCAGAGTTGCTACAGCTTGGGCAACACCTACACGTTGCTGCACGAGTT
CAACACTGCCATCGAGTATCACATCGACACTTGGTCATGCCCAGGAGTAG
GGCGATCGAATTGGTGAGCAGGCTGCTGTCACTGGCAATGCCACTCTGCC
ATCGGTGGTCATGGAGCGGGCCTACATGCGAACAGCACTCTCAACT
UFO06172.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pins-RA | 3279 | CG5692-RA | 249..1319 | 9..1072 | 5080 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27583088..27584098 | 9..1018 | 4880 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:05:30 has no hits.
UFO06172.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:27:35 Download gff for
UFO06172.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| raps-RA | 277..1354 | 1..1072 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:15:44 Download gff for
UFO06172.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| raps-RA | 242..1319 | 1..1072 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:49:38 Download gff for
UFO06172.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pins-RA | 242..1319 | 1..1072 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:49:38 Download gff for
UFO06172.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27583081..27584158 | 1..1072 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:15:44 Download gff for
UFO06172.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23408803..23409880 | 1..1072 | 98 | | Plus |
