UFO06185.5prime Sequence
1089 bp (992 high quality bases) assembled on 2009-08-08
> UFO06185.5prime
CAGTCGACATGGCCACACAACAGACCAAGTCGCAGGACGAGCTGGCATCC
AAAGGCCTGGTGTCCAAGCAGCCGGAAAACATTAAGGAGGAGAATGAGGG
CGAGGAGGAAATCGAGGAGGCAGCCGTCGTCGTGCCTCCGGACAGCGGAT
GGGCCTGGGTGGTGATGGTCGCCTCCTTCCTCTGCTGCACGGTCATTGAC
GGCATCGTCTTCTGCTCCGGACTCATTCAGGAGCAGCTGATGGCAGAGTT
CGGTGTGAGCAAGGCCTACGTGGCGTTCGTATCCTCGCTGCTCAGTGGAT
GCTACTTGATGGCGGGACCCTTTGTTAGTGCCATGGCCAATCGGTTTGGC
TTCCGTCCGGTCACGATCACCGGAGCCATATTCGCAGCCATCTGCTTCGG
ACTCTCGTACTTTGCCACCAGTGTGGAGTATCTGTTCCTAATCTACGGCG
TGCTCGGAGGCATTGGATTCTGTATGGTGTACATACCCGCTGTGGTGATC
ATTGGATTCTACTTTGAGAAGTGGCGTGCCCTGGCCACCGGAGTTGCGAT
GTGCGGTTCCGGAGTTGGCACCTTTGTCTTCGCCCCACTGACCAAAATCC
TGCTAAAGTCCGGCTGGCGTTATACGCTGGCCATTCAGGGCATCATCGTG
TTGTCCTGTGCCCTCTTTGGCCTGGCCTTCCGACCCATCCAACCCATTAC
GCTGTCTGTGACCAACGAGGAGGGTGATGAGCAGGAGAAGAAGAAGTTGA
ATGGTCATGGCAATACAGTGGCCCCTACGCCCCAACTCCACCAGGCCGCC
TTCACCAAGCCCCTGCCCGAGGGTCGTTTCGCCTACTCGATGCCCAACTC
GGCGCACAACACGTACATGGGTGCCTCCCAGCGTACCCATTATCCCACCG
CCCAGGAGATCTTCAGGGCATGACCTGGAGCGCGACCATCGGGCACGCTC
AGCAGCAGGCACGGAGCTGAGCAGCTAGAGTCGCAGCCCACACGCCCACG
AGATCCCAGCAGCTTACTTCATCTGCACAGGACTGACACGTGGATAACGA
GGAGGAGGCGAAACGATACTGTTTGGAAACGGAGCAAGC
UFO06185.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:21:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8468-RB | 3961 | CG8468-RB | 872..1975 | 9..1084 | 4785 | 96.9 | Plus |
| CG8468-RA | 3396 | CG8468-RA | 307..1410 | 9..1084 | 4785 | 96.9 | Plus |
| CG8468-RC | 3417 | CG8468-RC | 328..1431 | 9..1084 | 4785 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:21:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14227414..14228355 | 9..947 | 4545 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:21:24 has no hits.
UFO06185.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:27:23 Download gff for
UFO06185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8468-RB | 848..1944 | 9..1077 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:48 Download gff for
UFO06185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8468-RC | 328..1424 | 9..1077 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:58:36 Download gff for
UFO06185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8468-RC | 328..1424 | 9..1077 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:58:36 Download gff for
UFO06185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14227408..14228510 | 1..1077 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:48 Download gff for
UFO06185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10114913..10116015 | 1..1077 | 96 | | Plus |
