UFO06191.5prime Sequence
1027 bp (922 high quality bases) assembled on 2009-08-08
> UFO06191.5prime
CAGTCGACATGATGCGACTACCGGGAATGCCCATGCTACCAGGTGCGCAG
TTCTACGATCGTGGAAAGCGTCGCCATCCGCGGCAGCAAACGCTGATGCA
CTACCAGGGCATTCAGATGCTTTCGGACCGCCGGGAGCCGGAACTGGTGG
AGCCCAATGGCATTGTGGCCGATCCCAAGTGTCCGCCCGTGCCCGCCCAG
CTCAATAGCCTGTGGGCTCCGAAGGCCACCACCAAGTTGCCACCCTGGTT
GGCCTACGACAAGCAGGTGCTGTGCTTCAACGCCTACTTCAAGGAGAACC
TGACGGAGATCTATCACGCTCCCTACCAGGTGCGCAAGGTGAAGATCTTC
TTCTACCTCGAGGATGGCACCATGCAGGTCACCGAGCCGAAAGTGGAGAA
CTCAGGCATACCGCAAGGCTGTCTAGTTCACCGCCAGCGCATCCCAAAAG
CTCCACCCACCGACCGCGAGTTCATCTCCATCTTCGACCTGAACGTGGAC
ACGGATGTGCAGATCTTCGATCGGGTGTATCACATCAGCGGATGTGACGT
CTTCACGAGGCAGTTCCTCAATCGAGCTGGCATCTTCGTGCCTGAGGCCC
AGCAGGAGCCATGTGATCCCACAACAGAAATTCGAAAGCGATCAGGCTTG
AAGCAAACGGGTAATACCGCCACTTCGGCTTTGCCCAAAAAACATGCGTT
TGCCCAGTTCCTGAGTTCGACAGGCGAGTCCTTAAGTTTCAGGATATGGA
ACGATCGTAGTGAGTTGGTGATGTGCGAAGCTTGAGTCTGCTACTACTGT
AAGAGACCATTGACTAAGGAGAATTTCACGAATTCTGGGCGAGAGTCCAC
GACTTTTCTAAACGAGCAGTGCAAGGAGTTTCTGTCTCTTGCTGGCACAC
GCATGACGTGCTATGTGCTGGAACGTATGGCGATGGGCGTACGTACGACG
TGACCTGTCAAAAGGTCACTACCCGATCGATCGCATAGCCATGCTATGTT
TGGAGGTGTCTACTCAAGCTGATCGTC
UFO06191.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Efhc1.2-RA | 2572 | CG11048-RA | 172..1043 | 9..862 | 3880 | 97.5 | Plus |
| Efhc1.1-RA | 2559 | CG8959-RA | 300..599 | 238..537 | 300 | 73.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20240212..20240765 | 60..613 | 2770 | 100 | Plus |
| 2R | 25286936 | 2R | 20240886..20241056 | 613..779 | 655 | 97.7 | Plus |
| X | 23542271 | X | 15783054..15783353 | 537..238 | 300 | 73.3 | Minus |
| 2R | 25286936 | 2R | 20240107..20240157 | 9..59 | 255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:05:21 has no hits.
UFO06191.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:27:19 Download gff for
UFO06191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11048-RA | 113..1002 | 1..875 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:15:37 Download gff for
UFO06191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Efhc1.2-RA | 164..1053 | 1..875 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:49:32 Download gff for
UFO06191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Efhc1.2-RA | 164..1053 | 1..875 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:49:32 Download gff for
UFO06191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20240099..20240157 | 1..59 | 93 | -> | Plus |
| 2R | 20240212..20240765 | 60..613 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:15:37 Download gff for
UFO06191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16127604..16127662 | 1..59 | 93 | -> | Plus |
| arm_2R | 16127717..16128270 | 60..613 | 100 | -> | Plus |
