UFO06208.5prime Sequence
1133 bp (992 high quality bases) assembled on 2009-08-20
> UFO06208.5prime
CAGTCGACATGGCGACAATGTTGACATCGGACGAGGCGGGCAAGCTGCTC
GACTTCTCCCAGAAGCTGGACATTAATCTGCTGGACAAGATCGTCGAGGT
TGTGTACACAGCGCAGGGCGAGCAGTTGCGTCTAGCCCAGAGCATACTGA
CCACGCTGAAGGAGCATCCAGAGGCATGGACGCGGGTGGACAGCATATTG
GAGTACTCACAGAACCAGCGGACCAAGTTTTATGCTCTGCAAATCCTCGA
GGAGGTCATCAAAACGCGCTGGAAGGTCCTGCCGCGCAACCAGTGCGAGG
GAATCAAGAAGTATGTGGTCAGTCTTATCATCAAGACCTCGTCGGATCCC
ATTGTTATGGAGCAGAACAAAGTGTATCTGAATAAGCTAAACATGATTCT
GGTCCACATTCTAAAGCGCGAATGGCCACGCAACTGGGAGACATTCATCA
GTGACATTGTCGGTGCGTCGAAAACGAACGAGAGCCTGTGCATGAACAAC
ATGGTAATCCTGAAGAACCTTAGTGAGGAGGTGTTCGACTTTTCGCAGGG
TCAGATCACGCAGACTAAGGCCAAGCACCTGAAAGACACCATGTGCTCGG
AGTTCTCTCAGATCTTTACACTATGCTCCTTCGTGCTGGAGAACTCGATG
AATGCCGCCCTAATCCATGTCACGCTGGAGACTCTGCTGAGGTTCCTTAA
CTGGATACCGCTGGGCTACATCTTTGAAACGCAGCAAATTGAAACGCTGA
TATTCAAATTCCTTAGCGTACCCATGTTCCGCAATGTGACCCTGAAGTGT
CTGTCCGAGATCGCCGGCCTGACTGCGGCAAACTACGACGAGAATTTCGC
GACGCTCTTCAAGGACACGATGGTTCAGTTGGGAACAGATAGTCGGGCAG
AATATGAACATGAACCATTTGTTTAAGCATGGGTTCCGACACAGAGCAGG
AGCTGGTCCTTTATTTTGGCCATGTTCCTGTGCACCTTCCTCACGAGCAC
GGCAACTGATGAGATGCAGTATGTCGACTACTGATCAGCGCTCATGTATT
GTGATGATAGCGAGTGAGACTGGAGTTCAGATCGCTGATCTGACGCTTGT
GGAGATCACATTCGATCTCACCACTGAATCAAA
UFO06208.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:14:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| emb-RB | 3919 | CG13387-RB | 372..1436 | 9..1064 | 4895 | 98 | Plus |
| emb-RA | 4492 | CG13387-RA | 372..1436 | 9..1064 | 4895 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:14:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8404288..8405269 | 9..993 | 4730 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:14:06 has no hits.
UFO06208.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:39:25 Download gff for
UFO06208.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| emb-RA | 365..1439 | 1..1069 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:31 Download gff for
UFO06208.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| emb-RA | 367..1441 | 1..1069 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:50 Download gff for
UFO06208.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| emb-RA | 367..1441 | 1..1069 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:50 Download gff for
UFO06208.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8404283..8405357 | 1..1069 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:31 Download gff for
UFO06208.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8404283..8405357 | 1..1069 | 97 | | Plus |
