Clone UFO06211 Report

Search the DGRC for UFO06211

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:62
Well:11
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptImp-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO06211.5prime Sequence

1103 bp (1013 high quality bases) assembled on 2009-08-20

> UFO06211.5prime
CAGTCGACATGCACAGCAACAATAATAGCAGCAGACTCAACAACAACATA
AGCAACAATTATTATCAACAAAAACAATCGCTTATACGCTATTTGGATCG
AGCTGCTGTTGGTCTGAACGGTGTCGAGTTCGAGGGCAGCAAGCTGCATG
CCGAGCAGCTGGACAAGAACCAGCGGCGTAGCCAGCGTAACCAGCGCAAT
CCGTATCCGGGTATGCCCGGTCCCGGACGCCAGGCGGACTTTCCGCTGCG
CATTCTTGTGCAGAGCGAAATGGTGGGCGCCATCATTGGTCGACAGGGCA
GCACCATCAGGACGATCACACAACAGAGCCGTGCTCGCGTCGACGTCCAT
CGTAAGGAGAATGTTGGATCGCTGGAGAAATCGATTACGATCTATGGCAA
TCCGGAGAACTGCACCAACGCCTGTAAGCGCATCCTGGAAGTTATGCAGC
AGGAGGCCATCTCTACGAATAAGGGTGAAATTTGCCTCAAAATACTCGCC
CACAACAATTTGATTGGACGAATCATTGGCAAGTCGGGCAATACCATTAA
ACGGATCATGCAGGACACCGATACGAAGATCACTGTCAGCTCTATCAACG
ACATCAACAGCTTCAATTTGGAGCGAATCATTACGGTCAAGGGATTAATT
GAGAACATGTCGCGTGCTGAGAACCAAATTAGCACCAAGCTGCGCCAGAG
CTACGAGAACGATCTGCAGGCGATGGCGCCGCAGAGCCTCATGTTCCCCG
GTCTCCATCCGATGGCAATGATGTCGACACCGGGCAACGGCATGGTCTTC
AATACGAGCATGCCGTTCCCCTCGTGTCAAAGCTTTGCCATGTCCAAGAC
TCCGGCTAGTGTGGTGCCACCGGTCTTCCCCAATGACCTACAGGAAACCA
CCTATCTCTACATACCCAACACGCTGTCGGCGCCATTATCGGCACAGGGG
CTCGCATATCCGAGCATAATGCGCTTCTCGACGCATCCCTTAAATAGCCC
CCCCTCGACGCCGACAGCCGCTGACACAACGGAGCGCAGGTGACATTGTT
GCACCGAGTCAATGGAGGCCAGTACTTGATCTCGAGATGCCGAAAGGCTC
ATG

UFO06211.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:05:22
Subject Length Description Subject Range Query Range Score Percent Strand
Imp-RB 2863 CG1691-RB 307..1360 9..1051 4960 98.8 Plus
Imp-RA 3300 CG1691-RA 528..1581 9..1051 4960 98.8 Plus
Imp-RC 6762 CG1691-RC 501..1554 9..1051 4960 98.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:05:20
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10798000..10798545 1016..475 2470 98.5 Minus
X 23542271 X 10798619..10798994 475..100 1880 100 Minus
X 23542271 X 10805266..10805357 100..9 460 100 Minus
Blast to na_te.dros performed 2014-11-28 19:05:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2379..2450 5..77 137 67.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2396..2458 13..76 137 70.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2366..2429 13..77 133 69.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2313..2374 14..76 132 69.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2445..2486 17..58 120 76.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2951..2998 13..57 116 75 Plus
BS 5142 BS BS 5142bp 2037..2076 21..60 110 75 Plus

UFO06211.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:39:20 Download gff for UFO06211.5prime
Subject Subject Range Query Range Percent Splice Strand
Imp-RC 491..1535 1..1038 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:40 Download gff for UFO06211.5prime
Subject Subject Range Query Range Percent Splice Strand
Imp-RC 495..1539 1..1038 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:14 Download gff for UFO06211.5prime
Subject Subject Range Query Range Percent Splice Strand
Imp-RC 495..1539 1..1038 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:14 Download gff for UFO06211.5prime
Subject Subject Range Query Range Percent Splice Strand
X 10798619..10798993 101..475 100 <- Minus
X 10805266..10805363 1..100 96   Minus
X 10797973..10798544 476..1038 98 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:40 Download gff for UFO06211.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 10692006..10692577 476..1038 98 <- Minus
arm_X 10692652..10693026 101..475 100 <- Minus
arm_X 10699299..10699396 1..100 96   Minus