UFO06218.5prime Sequence
1145 bp (1019 high quality bases) assembled on 2009-08-20
> UFO06218.5prime
CAGTCGACATGAAGCCGTTGCTCCTAGTGTTGGCACTTTGTGGGGCCCAA
GTCCATGCACACTCTGTGGGTCTACGGCCCGACTATAACGACTATAGCGA
CGAGGATACCAGAAGGGATTGGCTCCCCGAGCCGCTGAAGCCAGTTCCTT
GGCAGTCGGAGACCCGATATGCACAGCCCCAAGAAGCTGTGGTTCAAGCG
CCTGAAGTCGGACAGATCTTGGGAATTAGTGGCCATAAAACCATTGCCAA
TCGCCCAGTGAACGCTTTCTTGGGTATACGGTATGGCACGGTTGGAGGTG
GCTTGGCGCGCTTCCAGGCGGCACAACCGATTGGATACCAGGGACGAGTT
AATGCCACCGTCCAGAGCCCCAATTGTGCCCAGTTTCCGGAGCTCGATCG
CCTGAGGTTATCTGAATCGCGGGGAGAAAACGTCGACGATTGCCTTACCT
TGGACATCTACGCACCCGAAGGCGCCAATCAGCTGCCCGTTTTGGTCTTT
GTTCACGGTGAAATGCTGTTCGATGGCGGTTCTGAGGAGGCCCAACCTGA
CTATGTTCTGGAAAAGGATGTGCTGTTGGTCTCCATCAACTACCGACTGG
CTCCATTCGGCTTCCTAAGCGCATTAACCGACGAGCTTCCTGGAAACGTC
GCCCTTTCCGATCTGCAATTGGCTCTTGAGTGGCTGCAACGCAATGTGGT
CCACTTCGGTGGCAATGCGGGACAGGTGACCCTAGTGGGTCAGGCTGGTG
GCGCAACATTGGCACACGCCTTGAGCCTTAGCGGTCGTGCCGGCAATCTC
TTCCAGCAGCTGATCCTGCAGTCGGGCACCGCCTTGAACCCCTACCTGAT
TGACAACCAGCCACTTGACACCTTGAGTACCTTCGCCCGTCTTGCTCGCT
GCCCACCACCATCCATTAACCCATCCGCACAAGGACTTAAGCCCCTATAC
GATTGGCTTCGCCCGACTGCCCACCTCCCAGCTGGTGGCGGCCTTCGAGC
AGCTGCTTCTTCAAACGAGCATCCTCGGCTCACCCAACTGGGTGGCTTCA
ACTGGTGGTGGCGACCCTCTAGCTTCCTACCCAGCCCCCCAGCCTCACTA
GCCACCAACAGCAGCTGGCCTGCCATGAATATCGGTCCCAGAGCC
UFO06218.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:16:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Glt-RD | 3260 | CG9280-RD | 49..1183 | 7..1135 | 5360 | 98.7 | Plus |
| Glt-RA | 3373 | CG9280-RA | 162..1296 | 7..1135 | 5360 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:16:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8673200..8674311 | 7..1115 | 5225 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:16:56 has no hits.
UFO06218.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:39:32 Download gff for
UFO06218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glt-RA | 108..1247 | 1..1135 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:02:24 Download gff for
UFO06218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glt-RA | 157..1296 | 1..1135 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:47:43 Download gff for
UFO06218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glt-RA | 157..1296 | 1..1135 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:47:43 Download gff for
UFO06218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8673195..8674334 | 1..1135 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:02:24 Download gff for
UFO06218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8673195..8674334 | 1..1135 | 98 | | Plus |
