UFO06245.5prime Sequence
1062 bp (955 high quality bases) assembled on 2009-08-20
> UFO06245.5prime
CAGTCGACATGGCCAAGACATCTATGCCGAGCCCAATTGCGCCATTGTCG
AGGATCACGCTCGCAAGTTCCGCGACATCTCGGACCCCACCCACTACTGG
GTGTGCCCCGAGGGTCAGGAGAAGGCTGACTACATCCAGTGCCCGGACAA
CTACGCCTTCATGGAGCAGCAGCAGAACTGCGTCGTCTGGGAGGAGTGGA
AGTGGGTCGAGCCCTACACCAAATAAACAGCCAACTTTCGCACTCTTGCT
GAACGTCGCAACTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAG
TGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGA
GATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGG
CGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTAC
TGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCG
CCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGAC
ATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCA
GCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCG
AAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCAC
CCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGA
ATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTA
GAAACTGCCGGAAATCGTCGTGTATTCACTCCAGAGCGATGAAAACGTTT
CAGTTTGCTCATGGAAAACGGTGTACAAGGTGACACTATCCCATATCACA
GCTCACGTCTTTCATGCATACGAATTCGATGAGCATCATCAGCGGGCAGA
TGTGAATAAGCGATAAACTGTGCTTTTTTTTCTTACGTCTTAAAAGCGTA
TATCAGCTGACGTCTGTTACGTAATGAGCACTGACTGAATGCCTCAATGT
TTCTACATGCAT
UFO06245.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34282-RB | 675 | CG34282-RB | 82..330 | 9..257 | 1245 | 100 | Plus |
| CG34282-RA | 462 | CG34282-RA | 82..330 | 9..257 | 1245 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18695402..18695650 | 9..257 | 1245 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:43:26 has no hits.
UFO06245.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:28:28 Download gff for
UFO06245.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34282-RA | 59..319 | 1..261 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:52:29 Download gff for
UFO06245.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34282-RA | 73..333 | 1..261 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:16:08 Download gff for
UFO06245.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34282-RA | 73..333 | 1..261 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 21:16:08 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:52:29 has no hits.
