UFO06246.5prime Sequence
1060 bp (941 high quality bases) assembled on 2009-08-20
> UFO06246.5prime
CAGTCGACATGTGCAACGGATGTGGATGCTGTGGACCCTGTAATGAAACA
CCCTGCTGTGGCCCCCACAGTCCGCCATGCGGAGCCCCGTCTCCCATCCC
GTGCTCTCCTGCTCCGGGCATGTGCTGTCCCCCTCTGCCCGAGGGCGGCA
TTCCCGATCCCCGTGTCTGGAACTACTACAACACGCCCCCAACTTATCCA
TGTGGCTTCCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGG
TAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCT
AGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGC
CCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCA
TTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGC
CCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGC
CGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGC
ATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGG
GGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAAC
TCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTA
GGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATAT
GTGTAGAAACTGCCGGAAATCGTCGTGGTATTCACTCCAGAGCGATGAAA
ACGTTTCAGTTTGCTCATGCAAAACGGTGTAACAAGGGTGACACTATCCC
ATATCACCAGCTCACCGTCTTTCATTGCCATACGAAATTCGGATGAGCAT
TCATCAGCGGGCAGATGTGATAAGTCGGATAAACTTGTGCTTATTTTTCT
TTACGTCTTTAAAGCGTATATCAGCTGACGGTCTGGTATAGTACATGAGC
ACTGACTGAAATGCCTCAAATGTCCTACATGCATGGATATCACCGGGCTA
TCAGATTTTC
UFO06246.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:04:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17376-RB | 518 | CG17376-RB | 158..360 | 7..209 | 1015 | 100 | Plus |
| CG17376-RC | 784 | CG17376-RC | 98..294 | 7..203 | 985 | 100 | Plus |
| CG17377-RD | 907 | CG17377-RD | 487..641 | 54..208 | 430 | 85.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:04:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6800487..6800683 | 203..7 | 985 | 100 | Minus |
| 2L | 23513712 | 2L | 6802059..6802187 | 182..54 | 420 | 88.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:04:18 has no hits.
UFO06246.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:28:33 Download gff for
UFO06246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17376-RB | 92..305 | 1..216 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:37 Download gff for
UFO06246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17376-RB | 92..305 | 1..216 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:34:39 Download gff for
UFO06246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17376-RB | 152..365 | 1..216 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 23:34:39 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 01:11:37 has no hits.
