UFO06252.5prime Sequence
1169 bp (1059 high quality bases) assembled on 2009-08-20
> UFO06252.5prime
CAGTCGACATGGAAATGAAAATGGCAGAGGCCCAGGAAACCAAGGACTCT
TGCTCGACGATCGAAGGCCAGCTGCCAGCTGGACCTGTTCGTGCTGAAGA
TGAGGAGGAAGAAGTGGAGGTCGAACAAGAGCAGCAGGAGCTGCTAAGCG
AACGGTGGTCGCCGTTGGGAGCCAACTACGATGACGCGAATAGCGCCAGT
TCTGGCGTGGATTGCGAACTAGAACCAGGACTGGAAAAGTCAGAAGCGCG
ACGTGGAAGCACTGGCAGCGAACTGGCCCGTCTGCGAAGCATAGAGGAGG
AGCAGGAGCTTCTGACAAGTTCTCTGCTGGCTTTGACCTCCCACTTTGCT
CACGTCCAGCTTAGAGTCCGCCAAATCGTGGAGGCGCCAGCGGAGGAGCG
GGATCAACTTTTACGCGACCTCGAGGACTTCGCCTTCCAAGGAATTCCAG
ACGCAGTCCAGTCCAAGGAATCCCATCCAGATAAGCCCGCAAGCGATGGT
GAAAAGGACCATGGTCCTGATAGCCAGCTCATCCAACAACTGAAGTCCCA
GCTGACTGAGCTGGAACAAATAGCCTACGAGGCTGGCGAACCTGGCATCC
TGCCGCAGCACGTATTGCTCGAGAAGCAAAAGTTTATCCTGGACGAGCTG
CGCGCCAAGCTCAATCTCCAGGTAGAGCAGCACGAACTGCCGGCCCTTAG
CACGGAACAACTGCGCCACCAGGTCGACAATGCCATCGGCGAGTTTGTGG
GCCCTCTGAAGATGAAGGAGCAACTGGTGGCCCAACTGAAGACGCAGATA
ACTGACTTGGAGCGCTTCATTGCCTTCCTTCAGTGCGATGCCATTGAGGG
ATCCGTTGGGGATCGACTGAAGCTTCTATCCGGTGCGTACACAGCTACGC
TGCAAAGCAGACAGCACGGAGTTCACAGGCAAGTTACGTTGCACAAACGC
TCAGCTACGACAGCTACTACCCGCATCTCGGGATTGGGTGCCCATTCTTC
GGCGAGAGCTTGCACAGCAAGCACATGCTGCTGACAGCTTCGTCCTCATG
CAATGTCGCCAGCACGCATCTGGTGACCACGACTCCGACGATCAGCCAAT
CGCTGAAAGACCCAAGCACCTGGGGAATTACTGCAGCTGAGGACTCAGAG
TACTGCCTGTCGCATGGAC
UFO06252.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3703-RA | 2496 | CG3703-RA | 228..1330 | 9..1091 | 5035 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 944527..945546 | 1021..9 | 4770 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:43:05 has no hits.
UFO06252.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:28:23 Download gff for
UFO06252.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3703-RA | 218..1306 | 1..1072 | 98 | -> | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:52:23 Download gff for
UFO06252.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3703-RA | 219..1307 | 1..1072 | 98 | -> | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:15:59 Download gff for
UFO06252.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3703-RA | 219..1307 | 1..1072 | 98 | -> | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:15:59 Download gff for
UFO06252.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 944463..945555 | 1..1076 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:52:23 Download gff for
UFO06252.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 838496..839588 | 1..1076 | 98 | | Minus |
