UFO06254.5prime Sequence
1134 bp (1018 high quality bases) assembled on 2009-08-20
> UFO06254.5prime
CAGTCGACATGAAACTGTTTCTTCTACTCCTTCTGGGAGCCTTGGGCTAT
TCGTTGGCCTATCCGCGCACCTATAGTTACGAGTATCCCCGCCGAAGGGC
CTACTCCACATCGTATTCCGGGAATTCGTATAGCTCTTTGGCCGGTCGGA
AGGCTAGGGAAGAAAGTACCACCAGCAAATCGGACAAGGAGAATGCCAAG
TTTGCTGGTGCTTCCAATCAGGAATTGGATGAAACCGGTGACGAACGCAC
ACTGCTGCTTAAAAAGAAGCTCAAGAGGTTGGCCAGGCCCTACCTAGGAG
GATATGGTGGATATGGCGGATATGGTGGATATGGCGGATATGGAGGATAC
GGCGGTGGTCCCTGCTCCCCGTTTGGTCGCGATGCTCGAGGTGGTCAGAA
TCAGAAGGATCCCGCTGAACAGGGTCGCTTTCTGTTCGACGTGAATGTGG
TGAAAGTATATCCCGGTGGATGTCGCGGCTATGGAGGAGGTGGTTTGGGT
GGAGGTCTTCTGTCTGATCCTCTTCCACCTGTACAACCCATTCCAGTGCC
AGTGCGTCCGTACGCACCATTTGCCACCTGGCTATCGCTCTTTGCTCCAG
GAATTCTTAACTCGGCCGTGGTGCCTGGTGTTCCAGTCAGAGATCCTCTA
AGAGATCCAGTTCGTCCTGCTGGAGATGCGCAGAGCGATCCTGAAGTGGA
TCCCAACTATGCGGCACCTCCGCCAGTAAGGCGACCTGTTCCGAATCGTG
TGTACTACGATTCTGCGGGAGCGGTAAGTTCATTAACTTTAATATATTGC
GAATTTTATATTTTTATTTATTGTGCCAAGCTTTCTAGACCATTCGTTTG
GCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCAT
AATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTC
ACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAATTCAGATG
GAGTTCTGAGTCATTACTGATCTATCAACAGGAGTCAGCGAGCTCGATTC
AATACGTCGCTGCATCATGAGTACTGTTGTATTCATAGCATCTGCGACTG
AAGCCATCACAACGCAGAGATGACTGAATCGCAC
UFO06254.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14329-RA | 1103 | CG14329-RA | 65..829 | 9..773 | 3825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17609423..17610238 | 9..824 | 4080 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:54:44 has no hits.
UFO06254.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:28:23 Download gff for
UFO06254.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14329-RA | 57..826 | 4..773 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:55:06 Download gff for
UFO06254.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14329-RA | 60..829 | 4..773 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:40 Download gff for
UFO06254.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14329-RA | 60..829 | 4..773 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:40 Download gff for
UFO06254.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17609418..17610241 | 4..829 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:55:06 Download gff for
UFO06254.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13435140..13435963 | 4..829 | 99 | == | Plus |
