UFO06257.5prime Sequence
1097 bp (969 high quality bases) assembled on 2009-08-20
> UFO06257.5prime
CAGTCGACATGCGGTTCAGCGGCTACAATCGTTATCAGTGCTTTTGCTCT
GCTGTTGGATCGCTGCTGCTATTATCCCTATTATCCTTCGCGGTCGGCGC
TGCGCTGACGCGGGCAGATGACGTCGGCAGCGACGCCGACGCCGGCAGCG
CCAGCAGGAAATGGCTGTGCAGCCGGACGGATATCTGCACCGCGGAGGGC
GAGATGGTGGCCGGACTGCAGTACGCGCCGGAGATCTTCGAGAGCCAGCG
GGATTGCCGACTGTCGTGCGGCAAGTACGGAGCCATCTGGCCCATGCCCA
CCGGCAAGGAGTGCACCATATCGCACAGGCGGGTACGATTCGATCCGTGG
AAGGTGCGTTTCCATGTTGTGGCGCCCGGCGAGGCGGCCACCCAGTTTCT
CAGGGAGACGAACCGGCTGTTCGTCTCGAATCTGCTGAAGGAGTGCATAC
GAAACTGCACGCTGGAGACCAGCAAGCAGATTCTGGTCAGATCCACGGTG
GCCAACGAGAGCCTCGTTCTGGACTGGCCCACCGACGAGAGCTACGCCCT
GGTGGTGCGAACCACTGAAACGGCCACCTTTGTGGACATCCAAGCGACGA
CGGTGTACGGTGCACGTCATGCCTTCGAGACGCTGAGCAACCTGGTCACC
GGCAGCCTGTCCAATGGCCTGCTGATGGTCACCACGGCCAACATCACCGA
TCGTCCGGCCTTTTCGCATCGCGGCGTCCTTCTGGATACGGCCCGTAACT
TTGTGCCGCTCAAGTTTATACGCAGCACCTTGGATGCGATGGCGGCCAGT
AAGCTGAATGTGCTCCACTGGCATGTGGTGGACACGCACAGTTTTCCGCT
GGAGATCACCAGGGTGCCGGAGATGCAGCGTTACGGGGCGTACTCTCATC
GCAGACGTACTCGCGCCAGGATGCACTGAATCTTGTGAATATGCCCGACT
GCGGGGCATACGGATACTGATCGAGATCGATGGACCCTCCCATGCGGCAA
TGCTGGCAATGGGTCCTGCCGCCGACTGGGCACATGTCCGTGTGCCTGAT
CAATCGCCTGGAGAGATTCTGTGTAAGACGGGCGGCACTGATCCCTG
UFO06257.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hexo2-RA | 2140 | CG1787-RA | 158..1234 | 9..1075 | 5105 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8710572..8711473 | 155..1049 | 4130 | 99 | Plus |
| X | 23542271 | X | 8709809..8709958 | 9..158 | 750 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 19:54:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7964..8012 | 125..173 | 110 | 69.4 | Plus |
| TART-C | 11124 | TART-C TARTC 11124bp | 9408..9456 | 125..173 | 110 | 69.4 | Plus |
UFO06257.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:28:20 Download gff for
UFO06257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hexo2-RA | 156..1232 | 9..1075 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:54:59 Download gff for
UFO06257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hexo2-RA | 158..1234 | 9..1075 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:34 Download gff for
UFO06257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hexo2-RA | 158..1234 | 9..1075 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:34 Download gff for
UFO06257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8709809..8709957 | 9..157 | 100 | -> | Plus |
| X | 8710575..8711502 | 158..1075 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:54:59 Download gff for
UFO06257.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8603842..8603990 | 9..157 | 100 | -> | Plus |
| arm_X | 8604608..8605535 | 158..1075 | 98 | | Plus |
