UFO06263.5prime Sequence
1097 bp (973 high quality bases) assembled on 2009-08-20
> UFO06263.5prime
CAGTCGACATGTGCCTGGACATTTGGCGGCACAAGAAGAAGGTGTTGCCG
CTGCTACTGCTAATGGCCATCGGCAGTATTATCTACTATCTATATACCCT
GAAATTGGAGGGGGAGCGTGATGAAAGTGCAACTTCGACAACTTCTCGCT
TGGAGCGTGACATAAGAGATCTGCAAGCGGTCTTCGAGTCGGAGGTCATA
CCGGATCTGGGAGCTTTGGGTCGCCCGGCAAGGGGTAATTGGACTGAGGA
GCAGCTGGAGGCCATCGCCAAAAGTCAGCGGGAAACGGGTTACAATGCTT
GGCTCTCCAAGCGCATCTCACCTGAGCGATCGCTCTACGATATGCGACAT
CGCAGCTGCAAAAAGCTCAAGTACCCGATGGAAAAGCTCCCATCAGTCAG
TGTGGTGATAACGTATCACAATGAGGAGGCAAGCGTGCTGCTTCGAACGC
TTAGCAGCTTGAGGAGCCGAACTCCGATCCAGCTGCTTCGAGAGGTTATC
CTGGTGGACGACGGGAGCACCCAAGCGGACGAGAAGCTCAACGACTTCAT
TAAGATCAAGTTTCTAAATATGGTGCAGCACCGCAGGATCACAACCCAGG
TGGGTCTGATGCATGCGAGAGTCGTGGGCGCGGAACTCGCCCTGGCCGAT
GTCCTCGTCTTCCTAGACTCCCACGTGGAAGTCACCAAAGGCTGGCTGGA
GCCGCTCATTGCTCCCATTTTAGAGGACAACAGGACCTGCACTACTCCTA
TTATAGACACCATTGACTTTGATAACTTTGCCTACAGAAAGGGGAAGCCG
TCGAGGGGCTTCTTCAACTGGGAATTCAATTATATTCAGCTTCCACTTCT
CAAAGAGGAGCGGTAGCCATGCCGGCTCCGCATAGATCCCATATGAATGG
TGGCCTCTTTGCTATGACGTGAGTGTCTCTGAGCTCGTGGCTACGACAGG
CTGAGATCTGGGGAGCGAGCAGTTCAGCTGATCTTAGCTGTGGTTGTGCG
GAGACAAATCTAAAGTCCTGCTCTAGCTGCCTCTCTTAGAACGAATTTCA
ATCGCTAACACAAGATAAATCTGAGAGAATTATTCAGGACTCCGCCG
UFO06263.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pgant8-RA | 2199 | CG7297-RA | 98..1137 | 9..1026 | 4675 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15684749..15685353 | 353..948 | 2650 | 98.2 | Plus |
| 3L | 28110227 | 3L | 15683969..15684315 | 9..355 | 1735 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:05:41 has no hits.
UFO06263.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:28:15 Download gff for
UFO06263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pgant8-RA | 95..1134 | 9..1026 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:15:50 Download gff for
UFO06263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pgant8-RA | 98..1137 | 9..1026 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:49:42 Download gff for
UFO06263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pgant8-RA | 98..1137 | 9..1026 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:49:42 Download gff for
UFO06263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15683969..15684315 | 9..355 | 100 | -> | Plus |
| 3L | 15684752..15685444 | 356..1026 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:15:50 Download gff for
UFO06263.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15677069..15677415 | 9..355 | 100 | -> | Plus |
| arm_3L | 15677852..15678544 | 356..1026 | 96 | | Plus |
