UFO06264.5prime Sequence
1116 bp (1012 high quality bases) assembled on 2009-08-20
> UFO06264.5prime
CAGTCGACATGAAGCATCTCCTGGAGGATCCCTCGGTCCTGGCCGAGCTG
CAGGTGCTGCCGGATAAGACCGGTGGTGTACAGGATCGACAGGAGGCCGC
CAAGAATCCTGCAGAGAATTCCGTGCCCGACGAAGATTTGCCGGCTGCAG
GAGGCGATTTGCTACGCGTTAAGGATACTCTGGGCCAGCTGGCCTGCAGT
CTGCACAAGCTGTCCAAAAACGATCACATAGTCATCGATCGAAAGCGCCA
TCAGGTGATTCGCACAGATGCGGCTACGCAACAATTAACGATTTACCGCT
GTCCGGATCCCGCCGTCATGGGGATTCGCCCGGCGATAGAGAAAAATGCC
CAGAATCCGCCTGCCAAAGTGGGTAGACCATCGAAAAGAGCCTGTTCGGT
TGCCACCGCTCCTGTGGCGAAGAAACCAACACTAGCGGAGCAAAAACCTG
CTCCCGACACCCATCGCACTAGATCCGGTCGCCAGGTGCGCAGCTTGATG
CCACAGCCCGCTCCCGTGACCAGTGGCTCAGCGGTTGAGCCAAGTTCTGC
CCGCATGCTTGAGATGCTGGTGGCCGACTTGCGGGACAAGGACTACCGGG
CACCCATGGCAGCGCCGAAAAGCACGAGTGTCAGCAGCAGCGTCAGTATA
AGCCAGGAACCGACCACAACGACAACCATCCAACGAGCCGTGCCCAAAAA
TGCCGTTTGTCCCGGCTGTGGAAAGATCTTTTTGGGACGCCGTCTGCAGC
GTCACTTTGTCAAATTCCCAGAGCACATGCCGCGTCCGGGCGAGCAGACA
CCACCTGTAGCTGTAGCTACAGTACCATCAACGGTTCATCCTCCCTCCAC
GCCGTCGCTGTTCGGCCTTCTGACCGCCCAACTGCAGCGGCATTCCCATC
TCAGCGAGGAACAGCGCTCTGATCTCTTTCTTAACGACTTAACGACTTTG
TGGAGCAGCTGCAATTGCGCAGCCACGGCTTATACGGAATACCTCTGGAC
TGGCATTTTGTAATGCACGAATTGCTCGAGTTTGGCCATACCCCGAGAGT
CAGTATGGGTTGATTATGTCCGCCATGAGTCGCCGCCTGCACCGATGCGA
ATCAAAGGAGCGGCTT
UFO06264.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13005-RA | 2027 | CG13005-RA | 111..1222 | 9..1114 | 5195 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16804070..16804930 | 241..1098 | 3855 | 97.3 | Plus |
| X | 23542271 | X | 16803760..16803992 | 9..241 | 1165 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:10:06 has no hits.
UFO06264.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:28:14 Download gff for
UFO06264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13005-RA | 74..1192 | 1..1114 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:40:19 Download gff for
UFO06264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13005-RA | 81..1199 | 1..1114 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:17 Download gff for
UFO06264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13005-RA | 104..1222 | 1..1114 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:17 Download gff for
UFO06264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16803753..16803992 | 1..241 | 98 | -> | Plus |
| X | 16804071..16804949 | 242..1114 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:40:19 Download gff for
UFO06264.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16697786..16698025 | 1..241 | 98 | -> | Plus |
| arm_X | 16698104..16698982 | 242..1114 | 97 | | Plus |
