UFO06270.5prime Sequence
1088 bp (984 high quality bases) assembled on 2009-08-20
> UFO06270.5prime
CAGTTCGACATGTACAGGACTTTTGTTTGGCTGTTAACCCTAATGGCAGT
GGCAAGTGCCGCCACCTCGGGTCGGGACTACTTGCCGCGCCCCCCCGCCA
AAGCCTATGTCTACGGCACGCCCCCGCCCAGCACGATGGCTCAGTTGCGA
CGGATAATCCAAGGTCACCTGGAGCGCTTCCAGCTGGCGGAGCAGGCCCA
CTTTTCCCGCCGCGCCAATGTGCAGCTGGGGAAATCGGAAGTGCCGGCGG
ACAGAAAACCGCTGGCGATGCAATTGTGGGTGGTTCGCACGCCCGCCATT
TCCGGCGCGGCCTCGGATAACGTCCTCGATTACGCCCTGCCGCCCAACAC
GCCCACTCCGAAGGACTACGCGCACAAGTTCCTGCCCGAGGGCAAGGATG
TGGTACCCGGAAGCTCTTACATACCGCTGCGGTTGCTGGTGATAAAGCGC
GCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCA
TAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCT
GGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAA
CCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATC
TATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGC
CACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAA
GCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCT
TGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAGT
TGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGA
TTGGCTGAGACGAAAACATATCTCATAAACCCTTTAGGAAATAGCAGTTT
TCACGTACACGCCACATCTGCGAATATATTGTGTAGAACTGCGAATCGTC
TGCATTCACTAGAGCGATGAAACGTTCAGTGCTCATGAAACGGTAACAGG
TGAACCTTCCATATCCCAGCTCACGCTCATGGCATCGA
UFO06270.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:47:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15554-RA | 801 | CG15554-RA | 89..536 | 10..457 | 2210 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31126643..31127070 | 30..457 | 2110 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:47:14 has no hits.
UFO06270.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:28:19 Download gff for
UFO06270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15554-RA | 83..538 | 7..462 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:45 Download gff for
UFO06270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15554-RA | 83..538 | 7..462 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:19:06 Download gff for
UFO06270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15554-RA | 85..540 | 7..462 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:19:06 Download gff for
UFO06270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31126233..31126257 | 7..30 | 96 | -> | Plus |
| 3R | 31126644..31127063 | 31..450 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:45 Download gff for
UFO06270.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26951955..26951979 | 7..30 | 96 | -> | Plus |
| arm_3R | 26952366..26952785 | 31..450 | 100 | == | Plus |
