UFO06277.5prime Sequence
1124 bp (1017 high quality bases) assembled on 2009-08-20
> UFO06277.5prime
CAGTTCGACATGTCAACAAGAGGTGGCTTCATTCGGCTCACAATTCTGGT
GACGGTGGCCGTCTTGGCGATCTTCGTCCTCCTAAGTGCTCTCCAGCGCA
CGGATCATCTCAAACCCACTCCCTTGGGCCAATATGGTGTTAGTGTGGAG
GCCGGACTGGCTGCAAAAGTAACTCCCCCACCGATTCGGCACCTGGAGGA
GCCCATAAAAGAGGAACTTGTGCGGCAATTGGAGCAGGAACTGCCAGAGG
TGGACTATGGCTTCTGGTACCACTGGGCCAAACCCATGGGCTACAAGATA
AACAAAACATGTGCTGTATATCCCGATCCCCTGGACCTGCAGCTGCACAA
CATCTACTGGCAGACCTTCGTCAACGCGAACGTGACCTTTCGGCTATACG
CCGCCTACTTGGACAAGCGGAAAGGGCTTAAATTGCCAACGGTAAGGATT
TTGGCCACTGCCAATCAGATCGACAACGAGTTCCCACCAACCCATTGTCA
AATGTGGTTTGAGGGATATCGGCAGCCCATTTTTGTACCCGTGGCGGAGT
TCCTGAGTGTGTGGGTCGAGGCGTGGGGCAATAAGCCGAATCTTAACTAC
CCGCACCTGTTGAGCTGTCCGGTTCCCAGTGAATTGCCGCCGCCTACGGT
GAACTCCTTTCCAAAAACAGTTTCCCTAGTTGCGCGGCATTGCGAAAAGG
CGGGAAATTCGCTGAGGGTCAATATGAATCGGAAGCAGTCACTGCCCGTG
GTGATCCCGCCCTCTCAAAATCCCAAGTCCCAAAATGCCACTATCCAAAG
TCAAAATGAAGCTCTTCAGAACTTTGGAGTTTGCCTCAAGGGATTCGATT
TTCCCTATGTGGATTTATCAGAGCGCCTTATCGAGTGTTTGAGCTGCAGC
GAATTTTGGGAGCCTCACGGATCTACGCCTATATGTACGATGTTCATCCA
GCCGGTGCAGAGGGTCCTCGACTACTATCAGCGCACTGGATACTTGGAGC
TGAGAACCTTTGACCTGGCCATGGAATGCCCAGACTGAGACCCTACCAGC
CATGTTTGCTGCCGCCAAGGAACTAAGAAAGACTAACGACTGATACCCTA
CAACGATGCCTCTCACGATCTGTA
UFO06277.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11384-RA | 2159 | CG11384-RA | 25..1128 | 10..1107 | 5175 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1174970..1176011 | 1050..10 | 4975 | 99.1 | Minus |
Blast to na_te.dros performed 2014-11-28 23:05:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmir\worf | 4174 | Dmir\worf WORF 4174bp Derived from AY144572. | 791..853 | 255..194 | 123 | 68.3 | Minus |
UFO06277.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:28:07 Download gff for
UFO06277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11384-RA | 12..1134 | 10..1123 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:15:48 Download gff for
UFO06277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11384-RA | 25..1147 | 10..1123 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:49:40 Download gff for
UFO06277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11384-RA | 25..1147 | 10..1123 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:49:40 Download gff for
UFO06277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1174889..1176011 | 10..1123 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:15:48 Download gff for
UFO06277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1068922..1070044 | 10..1123 | 98 | | Minus |
