UFO06283.5prime Sequence
1088 bp (965 high quality bases) assembled on 2009-08-20
> UFO06283.5prime
CAGTCGACATGAATTTCAACTGGTGTGCTGGGCTCTTTGTGGTCTTGGCC
TTGGTTTCGCCGATTTATTCCGCCTGCCCAAAGGAAAATCAAATGTGCTT
GAGAAACGGAACGTTTCAGTACTGTGATGGAGAGGAACGTAATTCATCGG
ACGAACTTATGCAAACACATCTGGTTTACTGTACGTCCATGTTCTGCGAG
CCGGAGGAGTTTCAGCACGACTACATAACGCGTAACCACGATCAAACACC
TCACCAGAACAAGTGGAAACGGGCTAGAATCGGCGAACGTGCCACCCTGC
ACGATGTTTGCCTTCTGCGAAACGGAATGCCGGTCACCAGGGAGTGCAGA
GTGAAGGACAACCGAGCCAACTGGGAGTCCACCGAACACTGGGATCCCGT
GGTGTGTTTGAGGCGATTCAGGGAGCACACGATCAGCGGTGACTTGAATA
GCCTGCATGACGACGTTCTCGAGGGCAGGAGGCGCACCAATGACACCCAG
GGGCGTCGTGAGATGACTGGCATAATGAGGAACATGTTCCGACAGAGAGG
TGGGAATCTTCTACCCGCCGATGTTCACATGACCGGACAAATGTTCGGCG
CCCTGATGCAGCAGGACAAGGATGCCACGGTCAGTGTGGACTTGGTCAGT
GTCTGCAAGGAGATAATGTCCTGCGACAGTAAGGTTCTTAGATTATCAGC
TCAGCTCAACGCTACCAATTCCCTGCTCAGCCAGTTCGAAAGCTACATGG
ATGCTCTTCCGGAGCAACTGGTTCCCAAGGACAGATGCGGCAAGGTGGTG
GCCAAGCCGACCAGTGATGAAGCAGAACGGCCACTACTGGAGTGGAAACG
TACAACTTCTCAGATATCGGTGTCCAAGCTCTGATTACCGGCAATATCAG
CGTGTTCTTCGCCACCCCGAATGCGATCGCATAACTGGATAGCTATATTC
TCTGCGCCAAGGGGATCACGAAAGACTTCCGCCAGTGCTTCTGTACGCTT
CATTCGATTCCTCGAAGACTGGCTAGTCAGAGATCTATCTGAAGCCTGCA
TTTGCGAAATCTCTTGCGCAATGAGCAGGGACACACTC
UFO06283.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11318-RA | 2764 | CG11318-RA | 108..1136 | 4..1025 | 4880 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31108062..31109084 | 1020..4 | 4700 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:42:47 has no hits.
UFO06283.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:28:09 Download gff for
UFO06283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11318-RA | 103..1139 | 1..1029 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:52:17 Download gff for
UFO06283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11318-RA | 106..1142 | 1..1029 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:15:48 Download gff for
UFO06283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11318-RA | 106..1142 | 1..1029 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:15:48 Download gff for
UFO06283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31108050..31109086 | 1..1029 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:52:17 Download gff for
UFO06283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26933772..26934808 | 1..1029 | 98 | | Minus |
