UFO06296.5prime Sequence
1050 bp (962 high quality bases) assembled on 2009-08-20
> UFO06296.5prime
CAGTCGACATGTACGACATCAAGCGCCTGGAAGCGGGACAACAGAAACTA
CAGCAAGCACAGCAACCACTGGGCCTTGACCTGAGCGGCCAGCAACAGCA
ACTCACCTGCAGCGTGATCACAGCGCCCGAGCATCGGGCTAATCCCAATC
CCAGCTCCATTTCGCAATCCAACCCCAGCGAGGCCACCCACATGACTTTG
TTGACGCTGCGCCGGCGCCGTTCGCTGCAGCGACGCGCCTGCCTTCTGAG
CATCCTCGCCGCCTTCGTCTTTGGCATGGCACTGGGCGTTGTTGTGCCCA
TGTTCGGCCTGCCCCGCCACCAGGACTCCCCGCCAGATCTGCCGGAGGAG
CAGATACAGATGGTTGCCGTGGAGCCGCTGAGCAGCTACCGCGTGGAGTT
CATCAAGGAGACGGACGAGCTGAGTGCCGAGCAGGTATTCCGCAATGCCT
TCCATCTGGAGCAGGACAAGGATGCTCCGGACTCGATGGTGGTGAAGAAA
TTGGACACCAACGACGGCAGCATCAAGGAATTCCATGTGCAGCGCACCGC
CAGCGGTCGTTATCGCAAGGGTCCGGAGAGGAGGCTGTCCAAGAAGATGC
CGGAAAGGGTGCAGCCACAAGAGACCTCTCGTTCTCCGACGACCTCGCCG
ACAAATCCTACCAGTGAGCACCAAGCGGGATTTATTGAGGAGGACGTCTA
TTGGGGTCCCACTGTGGAGCAGCTCTGCCCAAGGGATTCGCCGCCAAGGA
CCAAGTCTCTTGGGAACGCTTCGTTGGAGAGCAGGCCGAGTAGTTCGCCT
GGAGCAGGATGCGGAAGAATGCAAAATCGCATGGTGGTCTTTGCGGATGG
AACAAGGGCCTGTGCCCGCTACCGCCAGATACGGATCAGATTCAGGCGAG
ATATTCAGCTACTACTTGGGGCAGCTCTAAACATAGCATCTGGCCCCGAG
TGCCGCCACCGTGTGACACAGCACGCCATGGCCGCTGCCCTGGGCGACTA
CCAGCGCATTGAGACGCCGACATGGTGCTGACCGCTGCCTGTCGATCTGG
UFO06296.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fj-RA | 3551 | CG10917-RA | 1350..2418 | 9..1050 | 4665 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18234110..18235072 | 9..963 | 4405 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:00:49 has no hits.
UFO06296.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:28:02 Download gff for
UFO06296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fj-RA | 1340..2366 | 1..1008 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:59:02 Download gff for
UFO06296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fj-RA | 1342..2368 | 1..1008 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:39 Download gff for
UFO06296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fj-RA | 1342..2368 | 1..1008 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:39 Download gff for
UFO06296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18234102..18235128 | 1..1008 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:59:02 Download gff for
UFO06296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14121607..14122633 | 1..1008 | 97 | | Plus |
