UFO06311.5prime Sequence
1037 bp (913 high quality bases) assembled on 2009-08-18
> UFO06311.5prime
CAGTCGACATGCATTCTCTACGACTCCTGGTTCTTCTTGGTGTTCTGATG
GCCACTCAGGGCAGAGTTCTAGAACAGGACAAGGCTCCGGAGGTTGTCGC
TTCACCTCAAGAAATCAAACCCAACGTGGAGGTCAAGCAGGAAGTTGCCA
ATAAAGTGCGGGAAACCCAGCCGCAGCTGGGTGGCGCTGTCATCTCCCAA
GGCCAATCTTCTGCAGCTATCGATCAGGTTGGTGTGAAGGAGGGTCAAGA
TCAGGTGGCGAACTCCACAACTCCTGATGTCCAGGAAAGCCAACGCGAAG
GGGTTTCTTTCGTCGAAGTGACTAAAGAAAACCAGGAAGCACATGCCCCA
CTGAGTAAGGTCGTCAGTAGCCCATTAGCCCCAGCGATAGCCGAGGAAAA
GCAGCCCACTTCCAATGAGATACCCAAGGACCAGGAGCCAGGCAAAGAAG
TTATAACCCAGAACCATCCCGACGTCCAAGGACGCGACAATAAGATTCAG
TTTGTGTACGAGCAGCCTGGTCAAAACCAAAACCAGATTCCACAGATAAG
CATTCAGGATCTGGAGAAGATCTTCAAGTATCAGGGAGTGCAAGTGGTCA
ACGGATCTCAATCATTTAACCAGTATCCGAGCATCTACAACAAGTTCCCA
TCTTACCCGAAGGTGGAATACGTTTCTGTGGTAAACACATCGGATGCCAA
TGTGACCCAGCATCTCCACAACCACACGCACTATTATCCCAACCAGAAGA
AGCCCGGATTTCCCTTTCTCTTCCTGCCCAATCCCTTCGAGAAACTGGAA
CCCGTTTATGTTAATCTTAATCAAACTACGAACTCCACGGGGCGACGTGA
CTTATCACACCCACATCCACGAGGAAATCAAGCCGTTCCTCTTTCTGCCC
AATCCCTTCACGGACTTCCTCAGTAGTGGGGCGTCAGCTTGGTGGCTCTC
TCGATCATTCTATGTGGACAGACAGGACATATCAGTCTCAGTCGTGAGCT
GCTGCTGATACAGGACACGGAGTACAGTACTTGTAGT
UFO06311.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12011-RA | 1724 | CG12011-RA | 25..1065 | 8..1032 | 4560 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1694716..1695623 | 11..919 | 4420 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:40:01 has no hits.
UFO06311.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:25:31 Download gff for
UFO06311.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12011-RA | 16..959 | 1..944 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:23 Download gff for
UFO06311.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12011-RA | 18..961 | 1..944 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:08 Download gff for
UFO06311.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12011-RA | 18..961 | 1..944 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:08 Download gff for
UFO06311.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1694708..1695623 | 1..919 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:23 Download gff for
UFO06311.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1694708..1695623 | 1..919 | 98 | == | Plus |
