UFO06317.5prime Sequence
1106 bp (992 high quality bases) assembled on 2009-08-18
> UFO06317.5prime
CAGTCGACATGGTGCGGTTAAGTGCAGCCTGGAGCTGCTGTTTTTTGGCC
CTGATTGCGTTGGTATCCACTGTCGCCTCCTCCGCTGCGGATTATCCGGG
TGTCATCGAACTGGTGGGTTATAGCAATCGCCGCGCACGGACTTACTTCC
AAGAGCAACCCCGCTCCAATCCCAATCCCAAGCCGGGTTTGACTTCGGCC
AAAACCCGGGCGGATATTGAGACCGTGAAGCGGAATATCCGTAAATACGA
TCGTTTGCTAGAGTTGGATACGAAAAATCTGCCAGAGCAGCAAAAGGATA
TGCTCGCCAGGATTGTGGAGCGAGTGGCCAGGCTCAAGGAATCCCTGGAC
ATTGAGGAGCAGCAATTTAACCAGCAGGAAGCTACCTCCTCCAGGAGCAG
TAGTAGTACCACCACTAGTGCATCCAGTACTCAAGAATCGCAAACAGAAG
CGGAAACGGAGCTGGATCAGGAGCCGATCGAGCAGAGCACACAGCTGCCC
ACTGGAGCCACCGAAGCTGAAACGGATCCCACCCTAATCCTAGACGAAAC
TACGCTGCTGGAGCTGCAGAACACGATGAACGAGCAGGCTGCCATGAGCA
CCATAATGAAGGAAATGCCCACGACCACGGATATGAGTCAGCAGGAAGCG
GAATCGGAGGTCCCCGACGAGGAGGGAGAGACCACCTCACCAAATCTGAC
CACCCAATCGGAGGCAGCGACGACCAGTGATGAATCCCTCACCGATTCCA
CTGATCCCGATGATCAATTCGTAGCTGCCAGATCGAATAACAATATAGCG
GCCATAACGGCAGCGGATGATGCCGATGGCACCACCACAACCACCGCCAA
TACGGGCAGTCAGCAGCGCACGTTGACCACCATGGGAAAACTTATGAATC
GGGCCACCAAGCGACCCTTCGCCACAACGTCACCGCCGCCTGAAACGAGA
GTCAGCGTCGAGTAGCGTGAGTGCGCAGCTGCGAGTGCGGCACGCTCAAA
ACAGTAGCAACACACACGGCGGCGCGCCAGCAGATCACCGAACCGAATTG
CAACATCGTTTCAGCGAGGAAGCAAGCAAGCCTGCAGGTCAACCTCGAAT
GCGTGT
UFO06317.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dsx-c73A-RB | 3496 | CG32159-RB | 346..1361 | 9..1013 | 4780 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16450624..16451613 | 992..9 | 4640 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:11:21 has no hits.
UFO06317.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:28:58 Download gff for
UFO06317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32159-RB | 334..1353 | 1..1009 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:40:46 Download gff for
UFO06317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dsx-c73A-RB | 338..1357 | 1..1009 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:00 Download gff for
UFO06317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dsx-c73A-RB | 338..1357 | 1..1009 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:00 Download gff for
UFO06317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16450624..16451619 | 1..992 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:40:46 Download gff for
UFO06317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16443724..16444719 | 1..992 | 98 | | Minus |
