UFO06320.5prime Sequence
1149 bp (1019 high quality bases) assembled on 2009-08-18
> UFO06320.5prime
CAGTCGACATGTTAGTGGCCACCGACGAAAACAATACCAATACCACCACC
GCCAGCCGGAGCACACGCAACACCTGGAGATGGAGCCGCCTGGCGTTGGC
CGTTAGTCTCTTCGCCTACTGCTGCTGCGCCTCATCCGCGGCCACGCCCA
CCACCTCGGTGACCACGGCCGCCCTTCTCAGCGGCCACCAGCTGCTGCCC
TGGCAAACGGCGGCTGCGACGGCGGCCACCACGCCCTCCACCGCCCGCAA
TCTGTATGCGCCACACCAGAGCTTCAGCCGACACGATGACATCAGCTTTA
AGGATCTGCGCCAGCGCAGCGATGGCACGGTGGTGCAGTCCTTTGGTTCC
TATCGCACCGCTCGTCAGTTTGGTGGCTACTCAACCACTGCCCAGCGGCG
ATCGGACCCCGCCGTAAAAATCATTCCAGCTCCGTCCGTGGAATTGCCGC
AGGGTGAGCTGATCACGGTGCCCAAGCAGCTGGTGCCCACGATGCCGGAG
AATGTGACTCGCCAGGGTCGGCGTCGCAACTACATGTACATACCGCTGCA
GACGGAGGGGGAGAATGGATCCGCGGCGCTGCTACAACTGCGTCCCAGTC
GGAACGCCACGCTTTCCGCGCTGGGACCTCCGGCCGATGGAGTGGCCGCA
GTGGCCCATGAATTTGGCGCCGATCTGGCCACCCAGGGATCTGGACCGGA
GCAGCCACCGCTGGCATTGGAACTGGGTCCCGAGCGAACCGAACGCAGCG
ATCTTATGGCCGCCGCCAGCTCCACGGACAAGCTGGAGTACGCCGAGCCG
GAGAACACCAGTCGCCGTGTGGGCTTCCAATTTCCCAGCTACAGCCTAAA
GCCCGCCAGTCCCTTCCATCCGCAGCCTACCGCGAGGATAACCCATATTG
GGGACCCCAGTGCCCGGAGGCTATGAGCCCCAGCCGTACAGCGAAGATGC
GTCTCCGTTCCGCCACCCCACGCAGTACGAGCAGCACGAGACGCGCACAC
ACGCAGCTCTACTTTGATCGACCGCGTCCTCCAGCTCGAGTTTCCCGGCT
GTGAGCACTCAGCGCATGCTCAGCCATCCGACGATGTGACAGTCGGATTC
ATGACCGATCCGGCTACGACAGCGAACAAGCAAGCTCATCGGCAACTGA
UFO06320.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:02:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8170-RB | 3672 | CG8170-RB | 935..1984 | 9..1049 | 4910 | 98.5 | Plus |
| CG8170-RA | 3887 | CG8170-RA | 919..1968 | 9..1049 | 4910 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:02:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9022343..9023392 | 1049..9 | 4640 | 98.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:02:49 has no hits.
UFO06320.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:28:56 Download gff for
UFO06320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8170-RB | 910..1978 | 3..1060 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:56 Download gff for
UFO06320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8170-RA | 914..1982 | 3..1060 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:50 Download gff for
UFO06320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8170-RA | 914..1982 | 3..1060 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:50 Download gff for
UFO06320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9022357..9023397 | 3..1036 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:56 Download gff for
UFO06320.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4909862..4910902 | 3..1036 | 98 | | Minus |
