UFO06323.5prime Sequence
610 bp (36 high quality bases) assembled on 2009-08-18
> UFO06323.5prime
CAATCCACATGAGGCTTCCGAAAGGATATGGGACACGATCCCCGACCGGA
AACGCTGCCCAAAGTCTACCACTCTCCTACAATTCACAAACCAGTCTGAG
CCTTCTTCGGCTGCTCCCAATTGCTCTGGTGATTGGATCGCAAGTTCAAG
TTCTATACACGACATCCGTCAAAACAAAATCCCCCTCCGCAAGTGAACAA
TCCAGAAACGGCGAGAATCGTTCATTACTTTTTGATGACTATAATAAAAC
TAATTCGACATTATCAACTGCTGATTACCTGTCAGCCACAAGGGCAACCC
TTTACGCGTTTTCATCGCAGGATCGGGACGAGGACCATTCCCAAATGCCA
ATCAAGGCGTCTAACGCTCCGCACGGCCCCATTCCCACTAAAATGAGTCG
GGGTAAAATACCCATGGATACACCGGGCAGCGTGGATTTTATCACCAATA
GCCTTCCAATCAAAAATGTAGGGACAACTGATCAGCTGACGACTGTGACC
ATGCCCACCACAGCATTCACATCCCTAAAAGTCGACAGAAGTACCATGAA
ACAGCCAATTGATTCCACACGCACGAGGAATCATTGGACAGCAAGTGGAT
TCGCACGTGT
UFO06323.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:38:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dpr18-RA | 2630 | CG14948-RA | 461..1062 | 9..610 | 2635 | 95.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:38:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16066367..16066808 | 157..598 | 2030 | 97.3 | Plus |
| X | 23542271 | X | 16065552..16065699 | 9..156 | 545 | 91.2 | Plus |
Blast to na_te.dros performed 2014-11-28 20:38:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmir\spock | 4952 | Dmir\spock SPOCK 4952bp Derived from AY144571. | 2824..2880 | 425..480 | 120 | 70.2 | Plus |
UFO06323.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:29:01 Download gff for
UFO06323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dpr18-RA | 458..1059 | 9..610 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:14 Download gff for
UFO06323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dpr18-RA | 458..1059 | 9..610 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:23:52 Download gff for
UFO06323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dpr18-RA | 461..1062 | 9..610 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:23:52 Download gff for
UFO06323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16065552..16065699 | 9..156 | 92 | -> | Plus |
| X | 16066367..16066807 | 157..597 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:14 Download gff for
UFO06323.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15959585..15959732 | 9..156 | 92 | -> | Plus |
| arm_X | 15960400..15960840 | 157..597 | 97 | -> | Plus |
