UFO06325.5prime Sequence
1113 bp (980 high quality bases) assembled on 2009-08-18
> UFO06325.5prime
CAGTCGACATGAAGCACGAGAAGACCCTAGCCATGGCTGCTCCGCACAAG
CAGCGCCATGCGGACAGCTCCGCCCACGTAGTTCCACGTAGTCCCATAAC
CAAGGCCTTTGATTTCCTGCCCTGGACGCGAAGTCGCAGCAAGGTCAACA
TGACCAAGGTTCAAAGTCAGCCGGCGGAACAGCAGGCCTCTGTTTCCACG
GTTACCCCTGCAGAGAAATCCTCGGAGGTGCACTATCACAAGAACATTTT
CCGCAGTGGCGGTGGTCTCATCCGTGATATCCTGGTGGGAGATAAAAATC
TGCAGCTTAAGGATAAGCCACCACAGTCTCCCGTTCCTTCGCACAAAAAG
AAACAGAAGCACCTGTCGCGCAACAAAAGCTTGGATATTCGAGAACTTAT
TGGCTGTGTGGAGCGGGAGATGGCTCCTGCGACGGGAGGAGGTCCTGTGA
GTCAACCGCCACGTTTCATAGATGACACCTACATAGACCACAAGCCCAAG
CACATACTCTTCAATGACGATGAGAATACGGTGTACATTATAAAGAAGGA
GCAGCCCGTGGCCAAGTCCAGTCACAAGGCCAGCAATTCCACATCCAATG
CTGCCCAATCGAATGGAGATGTTCTGAAGGCGCGGTTGAAGTTTAAGAGA
TTACCCGGCGATCACTATGAAGCATCGCCGGAGGCGCTCCGACGGGCACA
TCTTCTCCACCAGCGATCCGAGCAGCGTCATCAGCTGCAGCGGCGCAAGA
GTCTCAGCGATCAGCAGAGCAGCTCCAGCCTGAGCAGTGGCGGCGGTGGA
GGTGGCAATGCTAATGGCAGCATTATGTTGGAACGCCCCAAAACCGATAA
GCCGCGCAAGAAGCTTTCGTTCCGGGAACCCATTATTGCCGGCGACCAAA
TACTACCACTCATACTCAGCGAACAGCGGCAGCGAGAACAGAGGCGTCGC
AGCTCACCCTGGAGCGAAGCAGGGTTGGCTTACGAATAGCGGACTGTGAT
AATTTATGCAATAATCGCACAAGATGCATTTCCTGCGCTGTGCGACAGCG
ATCGGAGTCTCAGGGAATGCCATCGTCGCACTTGGACAGCTTGAGTTGCC
AATTAATCTCTAG
UFO06325.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42673-RC | 3902 | CG32048-RB | 457..1539 | 8..1081 | 5065 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9586990..9588005 | 8..1022 | 4895 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:05:45 has no hits.
UFO06325.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:28:54 Download gff for
UFO06325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32048-RB | 450..1539 | 1..1081 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:15:52 Download gff for
UFO06325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42673-RC | 450..1539 | 1..1081 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:49:44 Download gff for
UFO06325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42673-RC | 450..1539 | 1..1081 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:49:44 Download gff for
UFO06325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9586983..9588046 | 1..1057 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:15:52 Download gff for
UFO06325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9580083..9581146 | 1..1057 | 98 | | Plus |
