UFO06328.5prime Sequence
1142 bp (1023 high quality bases) assembled on 2009-08-18
> UFO06328.5prime
CAGTCGACATGACGAAAATTAAATATGAACTTGTTCCAAGTGAGGAGCAA
GAACCAAACGAAAGTAAAAAACCTTTAAATTGGATAGTGAAAATATTATT
TGTTGTCTTGGCGCTTTTTACCCTGGTCATTTATACCTTGAGCGGCGCCA
ATAATCCGCTCAAGAACAATGCAGATCCATTTTCCCCTTGGAAATCCATG
AGACTCCTTGCGGGATCAGGTTGGACCAATAATCCCGGAGATCTGTCGAG
TCCTTTGAATGTTAAGCATACAACTCGTAGTCTGAGTACAGAGAAGCAAT
CTACGGAAGCAATCTATAATAAACTAGCAGATACTGAGAGCACCACCGAG
GATCAAACTGAGATAACTACCGTAGACCACACGGATGAAGTCGTAGAAAG
TAGCACTTCATCACCAGCTACTGGAGCATCGAAAACAGAGACTTTATATG
CACTGGAAGGAAATGGAAAGAAATACTTCGTCCATAGCCCGCAGTGCCAA
ATGAGCCACCCAAATCCGTTTGCCAATAACATTCAGCACATCTACAAGAA
ACATTCCTATATAGTGTGTGATAAAAGTCGCGACATGATCACAGTCAACT
ACAATGTAACTGACAGCACGTACAGGCTGCACAAGAACGAGAACTCCACC
TGCTGCTTCAAGCAGATCCTTCGAGCAGGAACTTCAGCCAATGCGGATCA
TAAGTACAAGCTGGGTCCTTGCGTAGAATTTCACCAGGACTTCTTGGTGC
CAACAGAAGTGAGTGCCATGATCACCTATTGCCGTCGGCCTCCATTCGAT
AAGGTGTCGCAAAAGGATGCCTTCAGTTTTGTGCATCCGCGAAAGGATCA
GATCGAAAATCCCACAACGCCGCATAGAAGAGGCCCAGCGTTTTGCTGTG
GGGCATTGATTCCATTTCCCGAATGAATCTTGAGCTTACGATGCCCGTAT
GTACGAGTACTTGAACATCACATTGGTTTGAGCTTCAGGATACACAAGAT
GGGCGATATACGTTTCGAATCTGATGGCGGTCTCACGGGATTTACAGACT
ACGCGACGCACGTGCATCTGAAGGCTTGCTGGATGCTGTCGTTATTGAGA
CTCAGGACAGATACACTTGCGCCTACGCGGAGACTGACAGTT
UFO06328.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15695-RA | 2723 | CG15695-RA | 194..1261 | 9..1063 | 5015 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20842333..20843034 | 9..710 | 3510 | 100 | Plus |
| 3R | 32079331 | 3R | 20843085..20843368 | 710..989 | 1225 | 97.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:40:37 has no hits.
UFO06328.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:28:52 Download gff for
UFO06328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15695-RA | 192..1259 | 9..1063 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:35 Download gff for
UFO06328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15695-RA | 194..1261 | 9..1063 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:30 Download gff for
UFO06328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15695-RA | 194..1261 | 9..1063 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:30 Download gff for
UFO06328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20843085..20843379 | 710..998 | 97 | -> | Plus |
| 3R | 20842333..20843033 | 9..709 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:35 Download gff for
UFO06328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16668055..16668755 | 9..709 | 100 | -> | Plus |
| arm_3R | 16668807..16669101 | 710..998 | 97 | -> | Plus |
