UFO06345.5prime Sequence
1070 bp (950 high quality bases) assembled on 2009-08-18
> UFO06345.5prime
CAGTCGACATGGGGAACTACGAGAAACTGGATGGCAGTTCCGCGGGGAGG
ATTACGGATGAGCTGTCCCGTAAGGAACAACGGAATTGCAGCCTGCGAAC
TTTGGTCTGCTGGAGTGCTTTGTTGTTCTCTTTGTTGTGCCTTTGCCTCG
GGTTCATCGGCCTGGGATTACTCGGCATCCAAACTGGGGAAGTGCACAAG
GTGGGGCAGCGGTTGGTGTGCTACTACGCAAGCGATGGCACCCACAATCT
CAGCCTTTTGGATGTTCCCGGCGACCTGTGCACCCACATCAATATCGGAC
CCGCCACTTTGGATAATGCCACCATAGTCCTTCCCGATACCCTCAGACAG
GTACTACAGAACGACACCCGATCCTTTCGTGCTGCCCATCCGCAGGTTCA
CCTGCTTCTCTGGATCGGTGGCGCCGACAGTGGGCGGTCATTTGCCCTCA
TGGTGGCGAACCACGCCATGCGAAAGTTGTTCCTGCGCTCCCTCCGGGAA
ATATTGCGCACCTATCCCAGTTTGGATGGCATCGATCTCGACTGGGAGTT
TCCGAGTGCCTACGATCGTGAGCGAATGCATCTCTCGCAGCTGCTTTACG
AGATTAGAACGGAGTGGCGGCGCGAAAAGCGTACCAATGATATTCTCTCG
CTGGCGGTGGCTGCTCCCGAGGGAATCGCCTTCTATGCCTACGACATCCG
AGAGATAAATCTGTACGCAGATTATGTAAATCTAATGTCCTATGATTTCC
ACTTCTACCGCGAGGATACACCATTTACCGGCTTAAATGCTCCGCTTTAT
GCCCGCTCGCAGAACGTTCGCTAATGGCCACGTTCAACATCAATTACACG
GTTCAGTGGTGGCTAAAAAGCGGTCTGGAGCCACAGCGACTGGTTGTGGG
TCTGCCCACCTACGGCCACTCATTTACGTTGGTGATCCTTTAATCATCGC
ATAGAAGCTCCTGCTTCCGGTACGGTAATGTGGCAACTGGCTCACCACTG
ACGAACTGTGATGTGTCCAAGTCTTCAGCAACTGGTCTACATGCGAACGT
CGCATTGAGCCTGCGATGAT
UFO06345.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cht11-RA | 1576 | CG3044-RA | 47..1034 | 9..990 | 4760 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6848549..6849471 | 930..9 | 4565 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:01:53 has no hits.
UFO06345.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:25:19 Download gff for
UFO06345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cht11-RA | 9..1016 | 1..1002 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:03 Download gff for
UFO06345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cht11-RA | 9..1016 | 1..1002 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:33:18 Download gff for
UFO06345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cht11-RA | 39..1046 | 1..1002 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:33:18 Download gff for
UFO06345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6848544..6849479 | 1..935 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:03 Download gff for
UFO06345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6742577..6743512 | 1..935 | 99 | | Minus |
