UFO06347.5prime Sequence
465 bp (41 high quality bases) assembled on 2009-08-18
> UFO06347.5prime
CAATCCACATGCCGCCGTTTAATTTCATCGGTCATGAGATCCGTCCCAAC
TACATTCCGGACTTAATGGTGGATGCCACATTTCGGAGGGTGGCTAAACA
TGCTATTACCTTTGCGATTTGTAACATGGATCACGATCGCCTGCAGGCGG
TTCAAGGATCCCTTTATGGCACCTTCTACAACCGGTGCCCCTACTTTATC
TATGCACCGGGTTTGTCGGGGCATTATGCCAATCACGAAACCATCGCACG
CCAACACAAGCCGAATGTGAGTCATGACCCATATATCCACTACTGGCTGG
GCTAGAATGTTAACCAGCATAATCGATCCAATGTTGTTCATAAAATCCAG
GAGCTGGACTCGTATCTGGGAAACATATCCTCTATTTACCGAGAGACCCA
TAATCTGGACAGTGCGATATTCCTTTCTTATTTCAAGAAGGGTTACGATG
TTCGATCGGGAGCAC
UFO06347.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| qua-RA | 3266 | CG6433-RA | 448..904 | 9..465 | 1640 | 90.6 | Plus |
| qua-RB | 3306 | CG6433-RB | 515..944 | 36..465 | 1565 | 90.9 | Plus |
| qua-RC | 3318 | CG6433-RC | 515..927 | 36..448 | 1480 | 90.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17489431..17489632 | 448..247 | 815 | 93.6 | Minus |
| 2L | 23513712 | 2L | 17489692..17489902 | 246..36 | 680 | 88.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:00:52 has no hits.
UFO06347.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed on 2009-10-05 15:25:25 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 22:22:17 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 19:56:48 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:48 Download gff for
UFO06347.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17489353..17489369 | 449..465 | 100 | <- | Minus |
| 2L | 17489431..17489633 | 246..448 | 93 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:17 Download gff for
UFO06347.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17489353..17489369 | 449..465 | 100 | <- | Minus |
| arm_2L | 17489431..17489633 | 246..448 | 93 | <- | Minus |
