UFO06353.5prime Sequence
1099 bp (967 high quality bases) assembled on 2009-08-18
> UFO06353.5prime
CAGTCGACATGACGGCAATAATACTCCTGGCTTGCCACTCGGTTCGCGAA
CTCGTCGATCTGTCAGATGCTCTGTGGCAGAACACTTTTAATATCGAACG
AAGTTTAAACTATTATCGCATCAAGCGCCGTTTGGAACTGTTTCGATTTC
ATTGCCGCGAGCTTTGGTTGCGTCAGGTGTCAAAAACATCCGATCCAATG
CATCGGAAGGCAGGCATAGATTTTGCAGCCATTGAGGCGGGTGCAGACTG
TGTCCTAAATATGGATGCCTTTGACGATACGACAACGGAACTACACAAGA
GGTTTTTACAGGCGGAGGGCACAAGACCCTTTCCTTCGGATTGCATCAGC
GGCATCGAGGTGGTGGATGGAAATGAATTTAAAGCCTCATTTTACGAATA
TGCAGATGCTGTGCCAAAATATTTTAACGACCAAATAGGGAAATTGAGCG
AAGGGATAAGTTTCACGGTGACTGGGAATCTCTCTGTAAACTGCGAGAGG
TTTTCCATCAATCTGGTTTATAACAATGACTCTCGAGATGTGGCGCTCCA
CATTAATCCACGGTTGCCACAAAACTATATTGTCCGCAACACCAAAGTAC
AGGACATTTGGGGAAACGAGGAAGTGTCCTCGGCATTGCCGTTTCTACTA
AGTCGAGGCGAGGAGTTTTCCATTCAAGTGCTAGTTACTGAGGCATGCTA
TATGATATCGGTAAACGGACAACACTTTGCAGCGTACACTCATCGAATCC
CTTATAGGGATGTTCGCATTCTGGAAGTGAAGGGAGATGTAAGTAACGTG
GAAATGAAGCGAACTTTGGTCTTAAAATATCCTGAGCGATTACCCCAGTC
AGACACTAATAACATTGAGCTTCACATAGATGATGGGATTAATGAATTGA
TGCCAGCGTTGAGAGACTGTTAAATACCTCATGAGTGGTGCATTATAGCG
CCCGAACACACAGTCGGACAATCGCCTAAGCGTACCATAGTCCGATGATC
TTGCTTACTTGCCTTATTATGGAGCATGCCACAAATTCATTGTCGAACGT
CCATGCTGAGATTGAAGGAAAGTGCGATACTCCCCACTGTTTAATACCT
UFO06353.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:59:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
galectin-RA | 1841 | CG11372-RA | 217..1324 | 9..1096 | 4885 | 97.2 | Plus |
galectin-RE | 1458 | CG11372-RE | 21..941 | 196..1096 | 3590 | 94 | Plus |
galectin-RF | 1536 | CG11372-RF | 287..1019 | 384..1096 | 3010 | 95.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:59:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 75076..75568 | 498..984 | 2120 | 98.2 | Plus |
2L | 23513712 | 2L | 72603..72978 | 9..384 | 1880 | 100 | Plus |
2L | 23513712 | 2L | 74903..75020 | 384..501 | 590 | 100 | Plus |
2L | 23513712 | 2L | 73505..73693 | 196..384 | 585 | 87.3 | Plus |
2L | 23513712 | 2L | 73410..73470 | 48..108 | 185 | 86.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:59:02 has no hits.
UFO06353.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:25:13 Download gff for
UFO06353.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
galectin-RA | 208..1267 | 1..1046 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:39 Download gff for
UFO06353.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
galectin-RA | 209..1268 | 1..1046 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:46 Download gff for
UFO06353.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
galectin-RA | 209..1268 | 1..1046 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:46 Download gff for
UFO06353.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 72595..72977 | 1..383 | 98 | -> | Plus |
2L | 74903..75018 | 384..499 | 100 | -> | Plus |
2L | 75078..75638 | 500..1046 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:39 Download gff for
UFO06353.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 72595..72977 | 1..383 | 98 | -> | Plus |
arm_2L | 74903..75018 | 384..499 | 100 | -> | Plus |
arm_2L | 75078..75638 | 500..1046 | 96 | | Plus |