UFO06364.5prime Sequence
948 bp (825 high quality bases) assembled on 2009-08-18
> UFO06364.5prime
CAGTCGACATGTCCACTTGCAGTTCATCCGAGATAGCGGAGAAGAAGCGC
ATTGCGCTGGCCAAATTGCAGGCCAAGAAATCCCAGCTGCTGGCCAGCGC
ACCCGCAACCAATGGAAAATCAACAACGTCTGCAACAGGTGCGACGCAAC
ATGCGAATAATGGAAAATCAAATCCCAATCAACCGCAGGCCAAATCCCCA
TTGAATTTCTACCGATCACCGACGGGGGAGCAGAAGAAGATCAACAGGAG
CGGTCCCACGCCCGGTGACAACAAGAGCTCATCCTTTCTGAACGCTCTGA
AAGCAATCAAACAGACATCCAACCGGGAATTGTCCCGCGGAGCAGCACAT
CCTTACCAGCGGCCAAATGGAGGGAACGAAAGAAACAAGCCCACTCTTTC
ACTGAGTTCGGATAAGGAGAAACCGGTGGCTGTGCTACTCGGAAACTCCA
TCACGTGTAATCTCTACTTGATCAGCACACATCGGTTTGCTGCCCAAACC
TCAGGATATCACGAACAGCTCGTGACCGTGTTCAAGAACATGCCCACCAA
GTGCTACGATGGCCAGACCCGTATCTGGAGTTTCGATCTGTCGGACTACC
AATCCCTGAAAACTCATGCAGCGGATCTAAAGCCATATGTTCACATGAAT
GGCATTCCGAAGAAGGTGCTGGATCTCTGCGGCCAGCCGCCAGTAGTTCC
GGAAAGAAGTGTTTTAGCTTCCATAGAACCGAGCTGGCGGACCAGCTAAT
GCCCTTCCAACACGATGGGGTTGTTGCTAGCAAAGAGATAGTTTGTGATG
GCTGGCAACTTCAGCTGCGACATATCAGTGTGCTGTGTCCCCTCCGACTG
CACTAGCATCAGCTCTTCGGAACTATGGCGCCTGAGTTCACAGGAGTGCT
AGCGTGGTGGTCATAGATAACGGGTACCATAGCTGAGCGGGTGTTTTT
UFO06364.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Marcal1-RA | 2411 | CG3753-RA | 74..838 | 8..771 | 3770 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4955582..4956346 | 8..771 | 3745 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:19:15 has no hits.
UFO06364.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:25:03 Download gff for
UFO06364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Marcal1-RA | 54..833 | 1..778 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:58 Download gff for
UFO06364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Marcal1-RA | 64..843 | 1..778 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:11 Download gff for
UFO06364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Marcal1-RA | 64..843 | 1..778 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:11 Download gff for
UFO06364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4955572..4956352 | 1..779 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:58 Download gff for
UFO06364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4955572..4956352 | 1..779 | 98 | | Plus |
