UFO06379.5prime Sequence
1053 bp (956 high quality bases) assembled on 2009-08-18
> UFO06379.5prime
CAGTCGACATGTCGGCGACGCACCTGGTGATTCTGGCCGTCGCTCTGCTG
GTGGACATCGCATCCGCGGGCGTTCCCCTTCCGCGATACGAGGCGCTCCT
CAAGCAGCAGTCCCCTCCATCGGATCCCACACTGGGTCTCTACGACGACG
GGGATAAGGTTATCCGCCTGTCGGTCGACAACTTCAATGCTACCGTCCTG
GACCAGAATCGCGGAGCATTAGTCGAGTTCTACAACACTTACTGCGGCCA
CTGTCGCAGATTCGCACCCACGTACAAGTCGGTAGCGGAGCACCTGTTGC
CCTGGTCCGAGGTGCTCATCGTGGCGGCCATCGATTGCGCCGCCGAGGAG
AACAATGGCATCTGCCGCAACTACGAGGTGATGGGCTATCCAACGCTACG
TTATCTGGGCCCCGGTTTCCAGCCGGGTCCTCAGCATTACGGGCAGAGCC
TGCATACGCAGGATAAAAACGAAATCCGCGAAATACTAGCGGGTATGGTG
GCCGCAGAGAACCTGACCAGCAGCCACAACAATTCCTACTGGCCAAACTT
TCACTACTTAACGGAGAACGATTCAGCCAGCAGTTTGTTCGAAGGTCTCA
GCAGCGCCACGGAGTACGTGGCAGTGGTTCACGAACCGGAGAACACCACT
CTAGGCGTCGAGGTGGCTCTGTTCATGACCCAGTGGCCAGCGGTGAGGGT
CCGGCGCGTCATCGATCCAGCCGTGGCCGCCAAATTCAAGATTGATCCGA
CCAATCTGCCCCTCAGCTTGGTGGATCGCAAAGGTGAAATTACGGCGTAC
GCGCCGGAATCTACCAATGGTGAATCGTATGCCAAGAAGCTGTGGGATGT
ACTGGGTAAGAAGAATATCACTCCCAGGCCAGTGAAGTGCACCAACCATC
GGCACCGCCGGCGTCCAGATATGACAAACGATGATCGTGATGCACGACAG
CTCGTACAGCGATCCACAGCTACCAGGTGCACAGCAGGCACTGATGCTGA
TCATGGACTACGCAGCTGCAGGTAAGCAGATCCTGACTGCGAGATCGCTT
GCT
UFO06379.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4670-RB | 2620 | CG4670-RB | 400..1309 | 9..917 | 4510 | 99.8 | Plus |
CG4670-RA | 2370 | CG4670-RA | 150..1059 | 9..917 | 4510 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 13233988..13234897 | 917..9 | 4485 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:30:02 has no hits.
UFO06379.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:24:54 Download gff for
UFO06379.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4670-RA | 139..1059 | 1..920 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:18 Download gff for
UFO06379.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4670-RA | 143..1063 | 1..920 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:35 Download gff for
UFO06379.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4670-RA | 143..1063 | 1..920 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:35 Download gff for
UFO06379.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13233988..13234903 | 1..917 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:18 Download gff for
UFO06379.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 9121493..9122408 | 1..917 | 99 | | Minus |