UFO06384.5prime Sequence
1058 bp (962 high quality bases) assembled on 2009-08-18
> UFO06384.5prime
CAGTCGACATGATTATCTTGTGGCTGATTCTGGCCCTAAGTGCCCTGCTC
TACTGGCTCCACAGAGCCAACAAGGATTACCACATCCTGTCCTTCTTCAC
CAAAAGAATTCGATTAAAGGATGGAACCCCTGTGGAGATCATCGCTCCCA
TAGCCAAGGGAAAAACAATATTCGGCAACACCCTTGACTTGTATGGGCGA
GATCACGCTGGTGTTTTCAATTACTCGCGTGAGCGTGCTAAGGAAATGGG
TACTAGCTACATAGAATATGTCTTTGGAAAGGCGATTTACAACATTATCG
ATGCGGATAGCGCGGAAAATGTGCTGAATCATCCGAATCTCATAACCAAG
GGGCTCGTCTACAACTTCCTACATCCATTCCTAAGGACGGGCTTGCTGAC
ATCGACTGGCAAAAAATGGCATGCTCGCCGCAAGATGCTCACTCCGACAT
TCCATTTCAACATATTGAACCAGTTCCAGGAGATCTTTAAAACGGAGAGT
CAAAAGTTCCTGCTACAATTTGAGGGTCAAGATGAGGTAACCATAACGTT
ACACGATGTTATTCCAAGATTTACTCTAAACAGTATTTGTGAAACCGCCA
TGGGTGTTAAGCTCGACGAGATGGCCGAGAAGGGGGATCGATACCGGGAG
AACTTCAGTCAGATTGAAGAATGCTTCATTCGTCGCTTGAGTAACCCACT
TTTATGGGGCGACAAGCTTTTCGAAATGTTTGCTGCCAAGGATTTCGCTT
CCGCACTCGATGTGGTTCATAGATTTTCGAGCGAGATTATTGCCAAAAGG
AGGGACTTGCTAAAGGATGAGCTGGACAAAGTTCAAGCACCGCTGATGAT
GATGGATTTGTCTCAAAGAAGCGTTTCGCCATGCTGGACACCCTAATTAT
GCTGAGAGATGGCTCATCGATCACATTGGATTTGTGAGAGGTGACACTTG
ATGTTTGAGGCTACGATACTACCTCATGGGCTCATTTTGTCTAATGAACA
TGTCCCTACGACAGCAGAGTTATGTTACAGGGAATCAGACCATAATGATG
ACTGACAC
UFO06384.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4p1-RA | 1680 | CG10842-RA | 42..1055 | 9..1008 | 4750 | 98.6 | Plus |
Cyp4p3-RA | 1667 | CG10843-RA | 166..1056 | 134..1004 | 1420 | 78.5 | Plus |
Cyp4p2-RA | 1777 | CG1944-RA | 363..693 | 325..655 | 305 | 73.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9240908..9241173 | 591..855 | 1280 | 99.6 | Plus |
2R | 25286936 | 2R | 9240339..9240541 | 207..409 | 1015 | 100 | Plus |
2R | 25286936 | 2R | 9240082..9240280 | 9..207 | 995 | 100 | Plus |
2R | 25286936 | 2R | 9243204..9243428 | 597..821 | 645 | 85.8 | Plus |
2R | 25286936 | 2R | 9240737..9240842 | 486..591 | 515 | 99.1 | Plus |
2R | 25286936 | 2R | 9240603..9240685 | 408..490 | 415 | 100 | Plus |
2R | 25286936 | 2R | 9241232..9241398 | 855..1008 | 290 | 92.2 | Plus |
2R | 25286936 | 2R | 9242900..9242978 | 411..489 | 200 | 83.5 | Plus |
2R | 25286936 | 2R | 9242640..9242785 | 207..352 | 190 | 75.3 | Plus |
2R | 25286936 | 2R | 9238097..9238172 | 414..489 | 185 | 82.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:52:12 has no hits.
UFO06384.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:24:57 Download gff for
UFO06384.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4p1-RA | 40..1097 | 9..1042 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:53:34 Download gff for
UFO06384.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4p1-RA | 42..1099 | 9..1042 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:32 Download gff for
UFO06384.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4p1-RA | 42..1099 | 9..1042 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:32 Download gff for
UFO06384.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9240082..9240280 | 9..207 | 100 | -> | Plus |
2R | 9240340..9240540 | 208..408 | 100 | -> | Plus |
2R | 9240604..9240685 | 409..490 | 100 | -> | Plus |
2R | 9240742..9240842 | 491..591 | 100 | -> | Plus |
2R | 9240909..9241173 | 592..855 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:53:34 Download gff for
UFO06384.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5127845..5128045 | 208..408 | 100 | -> | Plus |
arm_2R | 5128109..5128190 | 409..490 | 100 | -> | Plus |
arm_2R | 5128247..5128347 | 491..591 | 100 | -> | Plus |
arm_2R | 5128414..5128678 | 592..855 | 99 | -> | Plus |
arm_2R | 5127587..5127785 | 9..207 | 100 | -> | Plus |