UFO06390.5prime Sequence
1089 bp (990 high quality bases) assembled on 2009-08-18
> UFO06390.5prime
CAGTCGACATGGGTGGACAAAAAGCAACCATCCTCGCTGCCGTGGCGCTG
GTGATCGCCTGTGCCGCTCCAGCAATAGCCGATGTGAATGTCACCGCCTT
GTGCCTGCTGGTCAGCAATGGGAACTACGTGGCCAGCCAGTCGGACTGCT
CGACCTACTACCAGTGCCAGGGATCCTCGTTCACGGCCATGTCCTGTCCC
CAGGGCTACTACTTCGACAAGAATGCCCAGCAGTGCACGGGCACTGTGCC
GAGCACCTGCACCAGCAACTCCGATCCCTGTCTGGGCAAGGCGGTGGGAT
CCTTCGCGGCATCCAGTTCGTCCTGCGGCGGCTACTACTACTGCGGAGCC
TCCGGCGCTGTGAGGGGCAATTGTCCTGCCGGCGAGAACTTCAATCCCAC
CACAATGGCCTGTGTGTACAAGAACAACTATCCATGCAGCGAGTCCGCCG
GTGATGGCTCCACTGTGTCGGTCGCCCTCAACCTATGCAATCTTGTCAAG
AATGGCTTTTACTTTGGAAGCCCTTCCGACTGCAGTGGCTGGAACTTCTG
CCAGGACAACGTTCTGCACTCGGGATCCTGCGAAGATGGTCTAGTATTCA
ATGTGCAGGCCAGCAACTGCGGCTACAAGATGGCCTCATCCTGCGCCCAG
GTCACCAATGATCCATCCCTGACCGGAGTGTCTGCTCCGACCACATGCTC
CTCGTCGGGAGCAACGATCGCAGCCACCGCGTGCAACCAGTACTACCTGT
GCTCCGCCGGCAACTATCAGCTGATGACCTGCCCCTCGGGATACTACTAT
GATACCATCTCGAAGCGTGTGTGACCAGGATGGAAGCGAGGAACGACTGC
GACAGATGTGTGGGCACCACTGCGACCTTTGTAAACGCCTACTCGGCACA
TTGCTCTGATACTATACTGCTGACGCGTCAGACGCGTGAGGCTGCCCACA
CTACTACTCACGAGACTCGATCTGCTAACGGTGAGCCAGTCTCTGCTGCA
TCCACGCAGGAGGACTCACGTCTCTCTGTCACTCCGCCGACTCTCGATCG
CTCTTGTCACTCTCGTCGATCCTGTCGATTCTGTCATCT
UFO06390.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:38:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7290-RB | 1667 | CG7290-RB | 46..963 | 9..920 | 4450 | 99.3 | Plus |
| CG7290-RA | 1358 | CG7290-RA | 46..963 | 9..920 | 4450 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:38:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20205040..20205927 | 898..12 | 4390 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:38:27 has no hits.
UFO06390.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:30:03 Download gff for
UFO06390.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7290-RA | 43..960 | 9..920 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:22 Download gff for
UFO06390.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7290-RA | 46..963 | 9..920 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:24:01 Download gff for
UFO06390.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7290-RA | 46..963 | 9..920 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:24:01 Download gff for
UFO06390.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20205017..20205931 | 4..917 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:22 Download gff for
UFO06390.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20198117..20199031 | 4..917 | 98 | | Minus |
