Clone UFO06396 Report

Search the DGRC for UFO06396

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:63
Well:96
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG15173-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO06396.5prime Sequence

459 bp (209 high quality bases) assembled on 2009-08-18

> UFO06396.5prime
CAGTCGACATGTTAGTGAGAAATATTTGCAAGTTTACGCAAGTTATGGGC
AGGTTCCGCGTTGTCGTGAATCCCAGAGATTACTGTCATCTTGCGCCGCT
GAAGAGAAGCCGTTATCACCAACGGTCAGAATTCGGATGTCGACCGCTGT
GCTCAAATGCTGCGGGGCTACGAAGTGTCCCTGGGGCAGCTCCGCCCGCT
TCCTGGGCTCTCCCGGGTGGATGTTTTGGGGCATTTTCCGCGTGCCTTTC
ACTCTGGATCTCTGGTTTGGTGGCGCGCCGACACAAAAAAGAGAGGAACC
TCCGGAGAGAAAAACCTGGATCAAGAACCATTCAAACGATTCATTTCTGG
TGCATTCCAAAGGGACCAGTACAAAAAGGGCGAAAAAAAGGCTTCCCCTG
GTTTTGCCAATGGGGGCGGGATATTTCAAGACAAGGGGGGGGTCCCCTTT
TTTGTTTTA

UFO06396.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:56:59
Subject Length Description Subject Range Query Range Score Percent Strand
Ttc19-RA 1440 CG15173-RA 244..635 7..425 1095 87.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:56:58
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19044677..19044905 241..7 825 94 Minus
Blast to na_te.dros performed on 2014-11-28 18:56:58 has no hits.

UFO06396.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:30:06 Download gff for UFO06396.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15173-RA 236..513 1..293 91   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:41 Download gff for UFO06396.5prime
Subject Subject Range Query Range Percent Splice Strand
Ttc19-RA 238..515 1..293 91   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:38 Download gff for UFO06396.5prime
Subject Subject Range Query Range Percent Splice Strand
Ttc19-RA 238..515 1..293 91   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:38 Download gff for UFO06396.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 19044634..19044909 1..293 91   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:41 Download gff for UFO06396.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19044634..19044909 1..293 91   Minus