UFO06396.5prime Sequence
459 bp (209 high quality bases) assembled on 2009-08-18
> UFO06396.5prime
CAGTCGACATGTTAGTGAGAAATATTTGCAAGTTTACGCAAGTTATGGGC
AGGTTCCGCGTTGTCGTGAATCCCAGAGATTACTGTCATCTTGCGCCGCT
GAAGAGAAGCCGTTATCACCAACGGTCAGAATTCGGATGTCGACCGCTGT
GCTCAAATGCTGCGGGGCTACGAAGTGTCCCTGGGGCAGCTCCGCCCGCT
TCCTGGGCTCTCCCGGGTGGATGTTTTGGGGCATTTTCCGCGTGCCTTTC
ACTCTGGATCTCTGGTTTGGTGGCGCGCCGACACAAAAAAGAGAGGAACC
TCCGGAGAGAAAAACCTGGATCAAGAACCATTCAAACGATTCATTTCTGG
TGCATTCCAAAGGGACCAGTACAAAAAGGGCGAAAAAAAGGCTTCCCCTG
GTTTTGCCAATGGGGGCGGGATATTTCAAGACAAGGGGGGGGTCCCCTTT
TTTGTTTTA
UFO06396.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:56:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ttc19-RA | 1440 | CG15173-RA | 244..635 | 7..425 | 1095 | 87.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:56:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19044677..19044905 | 241..7 | 825 | 94 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:56:58 has no hits.
UFO06396.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:30:06 Download gff for
UFO06396.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15173-RA | 236..513 | 1..293 | 91 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:41 Download gff for
UFO06396.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ttc19-RA | 238..515 | 1..293 | 91 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:38 Download gff for
UFO06396.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ttc19-RA | 238..515 | 1..293 | 91 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:38 Download gff for
UFO06396.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19044634..19044909 | 1..293 | 91 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:41 Download gff for
UFO06396.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19044634..19044909 | 1..293 | 91 | | Minus |