UFO06406.5prime Sequence
1091 bp (998 high quality bases) assembled on 2009-08-18
> UFO06406.5prime
CAGTCGACATGTCGGATAAATTGGTTTTGTATGGCATGGATATTAGTCCT
CCTGTTCGCGCTTGCAAGCTGACCTTGCGGGCCTTAAACTTGGACTACGA
ATACAAGGAAATGGATCTACTGGCAGGAGATCACTTTAAGGATGCGTTCC
TCAAAAAGAACCCGCAGCACACCGTACCACTCCTCGAAGATAATGGTGCC
CTTATCTGGGATTCACATGCTATTGTATGCTACCTGGTGGACAAGTATGC
CAATTCGGATGAGCTATATCCCAGGGATCTGGTGTTGCGCGCCCAGGTGG
ATCAGCGTTTGTTCTTTGATGCCAGCATTCTGTTTATGTCGCTGCGAAAT
GTCAGTATACCCTATTTTCTTCGCCAAGTAAGCCTGGTACCCAAGGAGAA
GGTGGACAACATTAAAGATGCATATGGCCATTTGGAGAACTTTCTAGGGG
ATAATCCCTATTTGACCGGGTCGCAACTGACCATAGCTGATTTATGCTGC
GGAGCTACTGCATCCTCGCTGGCCGCTGTTCTTGACCTGGATGAGTTAAA
GTATCCAAAGGTGGCTGCTTGGTTCGAACGACTCTCTAAGTTGCCCCACT
ATGAGGAAGACAATCTGCGGGGCTTGAAGAAGTATATCAATTTATTGAAA
CCCGTATTAAATCTGGAGCAAGCCAAGCTTTCTAGACCATTCGTTTGGCG
CGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAAT
CACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACC
AATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGA
GTTCTGAGGTCATTACTGGATCTATCACAGGAGTCCAAGCGAGCTCGATA
TCAAATTACGCCCGCCCTGCCACTCATCGCAGTACTGTGTAGTCATAGCA
TCTGCGACATGAGCATCACAACGGCATGATGACTGATCGCAGCGCATCAG
CACTTGTCGCTGGTATAATATTGCCCATGTGAACGGGGGAGAGTGTCAAT
GGCAGTTATCAACCTGGACTCCCAGGATGCTGAAACGAACA
UFO06406.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:36:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstE2-RA | 890 | CG17523-RA | 38..701 | 8..671 | 3290 | 99.7 | Plus |
| GstE1-RA | 831 | CG5164-RA | 125..359 | 91..325 | 290 | 74.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:36:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18399523..18400186 | 8..671 | 3290 | 99.7 | Plus |
| 2R | 25286936 | 2R | 18398517..18398751 | 91..325 | 290 | 74.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:36:17 has no hits.
UFO06406.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:29:54 Download gff for
UFO06406.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE2-RA | 28..699 | 1..671 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:32:55 Download gff for
UFO06406.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE2-RA | 30..701 | 1..671 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:27 Download gff for
UFO06406.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE2-RA | 30..701 | 1..671 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:27 Download gff for
UFO06406.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18399515..18400186 | 1..671 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:32:55 Download gff for
UFO06406.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14287020..14287691 | 1..671 | 99 | == | Plus |
