UFO06422.5prime Sequence
1112 bp (1004 high quality bases) assembled on 2009-08-18
> UFO06422.5prime
CAGTCGACATGACCCAAGTGAAATCTGTACTTTGCGTGGGTTGCACGGTG
ATTGACTTCGTGACCATCAATGGGAGCTATCCTATGGAGGACACCGATCG
GCGATGCCTGGATGGGTTCTGGCAACGTGGCGGAAACGCCTCTAATGTGA
GTACTGTGCTCCGGGTTCTTGGATGCAAGGTGGACTTCTTTGGAATGCTC
AGCAGGTCGGATGGATTCCGAGTGCTTCTCGACGATCTCTCGAAGCGGGA
AATCGGCACGAATGACTGTCCCTTCACGGACAGGGATCCGCCATTCTCCT
CTGTGATCCTGGCTCAGGATTCCGGCACCCGCACCATTATCCACTGCAAT
AAGGACTACCCGCAGACCACCTATGAGGACTTCAGCAAGATAAACCTTTC
GCAGTATGGATGGGTACACTTCGAGGCTCGCAACACGCCGCACACCTTAA
AGATGATGCAAAGCATCCGGGAGTACAACCAAAGGACCGGACAAGGCATC
ATTATCTCGTTGGACTTCGAAACGAGGTATGAACAAAACCAGGAATTGTG
TGCGCCCTGCGATTTTGTGGTCTTCTCCAAGGAGCTGGCTGGTCAGTTGG
GTTGGAAGACACCGCGGCAGTCGTGCGAGGAGTTGGCCTCCAAAATTCCC
GAAGGTGGTCCAAAGCCTGTCTTCATTTGTCCCTGGGGAAGCGCCGGAGC
TGGAGCTATGGATGCTAATGGAAACTACTATGAAATGTCGTCCTATAAAC
AGGACAAGGTAGTTGACACGCTGGGAGCCGGGGACAGTTTCATGGCGGGA
TTCATCTACGCCACCCTCAAGGCTCGTCGAAGTCTAGCGGAGGCTGTTGA
CTTTGCCAACCGAGTTGCCAGTCACAAAATCACTGGATTCGGCTACGAAC
ACATTTCCCAGCTTAGCTTAACCAAGGCAGCTTTCTAGATATTCGTTTGG
CGCGCGGGCCCAGGTAAGTGGTCATATCATATCATATCATATCATAATCA
CACTAGCTAGAGATCTGTCATGACTAGTGCTGATTCCTCACCATAAAAAC
GCCCGCGCACGGACGTCTGACATCCGATGAGTTCTGAGTCATACGGATTA
TCACGAATTCAA
UFO06422.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7328-RA | 1398 | CG7328-RA | 325..1242 | 9..926 | 4590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20139366..20140283 | 926..9 | 4590 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:30:57 has no hits.
UFO06422.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:29:50 Download gff for
UFO06422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7328-RA | 214..1140 | 1..926 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:57 Download gff for
UFO06422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7328-RA | 316..1242 | 1..926 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:02 Download gff for
UFO06422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7328-RA | 316..1242 | 1..926 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:02 Download gff for
UFO06422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20139366..20140292 | 1..926 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:57 Download gff for
UFO06422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20132466..20133392 | 1..926 | 99 | | Minus |
