UFO06425.5prime Sequence
1095 bp (953 high quality bases) assembled on 2009-08-18
> UFO06425.5prime
CAGTCGACATGCGTGTGGGTTTTACGGGTAATTGTGTTTTTAAACGCCTG
CTGCACACGGAAATAGGCGGAAAGTATGCCAAACAGCAGCCGCGGAACCT
CAAAGGACGGAGCAAGAGCTCCCAGGAGTGGCTTACGCGCCAACTGGCGG
ATCCGTACGTGGAGAAGGCCCGCATGATGAACTATCGCTGCCGGAGTGCC
TTCAAATTACTGGAGATCGACGACAAATACGGAATACTGCGGCCCGGAGA
CACAGTTTTGGAATGCGGAGCTGCTCCTGGCAGCTGGACCCAGGTGGCCG
TGGAGCGGACCAATGCCAACGGAAAGCAGGAGCGGGCGCCACAGGGAGCC
GTCTTTAGCATCGACCTGTTGCATTTCCATGCTGTGCCGGGTGCCACAAT
CTTTGGCGGCATGGATTTCACTTCTTCGCTGGCACAAAAGCGGCTGAGGG
AAGCGTTACAAGACAGAAAGGTCAACTGCGTGCTGTCCGATATGGCACCC
AATGCCACCGGAGTGAGGATGCTGGACCAGGAGAGCATCACTAACCTCTG
CTACGAGGTGCTGCGCTTTGCCCTGGCCATGTCTGCTCCGCAGGCCCATC
TGGTGGTCAAGGTGTGGGATAATGGCGACGTGCCCAAGCTGGAGCGAGAT
ATGCTTAGGTTTTATGAGAAAGTGAAGAGAGTAAAACCGCGCGCTAGCCG
CGGAGACTCCGCCGAGCACTTCCTGGTGGCCAGGAACTTTAAAGGAGCAA
CGGATAGTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTA
AGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAG
GAGATCCTGGTCATGACTAGTGCTTGGATTTTCACCAATAAAAAACGCCC
GGCGGCAACCGAGCGTTTTGAACAATTCAGATGGAGTTCTGAGGTCATTA
CTGGATCTATCACAGGAGTCCAAGCGAGCTCGATATCAATTTACGCCCGC
CCTGCCACTCATCGCAGTTACTTGTTTTTATTCATTTAGCATTCTTGCGA
CTTGCAGCAATCCAAACGGCATGATGACTGGATCGCAGCGGCATC
UFO06425.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:03:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11447-RA | 991 | CG11447-RA | 34..783 | 9..758 | 3705 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:03:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19861643..19862392 | 9..758 | 3705 | 99.6 | Plus |
Blast to na_te.dros performed 2014-11-28 19:03:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| aurora-element | 4263 | aurora-element DMAURA 4263bp Derived from AB022762 (d1268008) (Rel. 59, Last updated, Version 1). | 3666..3727 | 244..305 | 112 | 64.5 | Plus |
UFO06425.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:29:39 Download gff for
UFO06425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11447-RA | 29..783 | 9..766 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:05 Download gff for
UFO06425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11447-RA | 34..788 | 9..766 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:07 Download gff for
UFO06425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11447-RA | 34..788 | 9..766 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:07 Download gff for
UFO06425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19861643..19862397 | 9..766 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:05 Download gff for
UFO06425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15687365..15688119 | 9..766 | 99 | == | Plus |
