UFO06432.5prime Sequence
1154 bp (1035 high quality bases) assembled on 2009-08-18
> UFO06432.5prime
CAGTCGACATGAAGCTGTTCCTACTTACACTCTCCGTGGCCCTAGCCGTG
GTCGCCGCCTCCCCAGGCTTCAACCGCACCAGCCTTCTGCCCCAGGTGAC
CATTTCCGAGGGTGCCGAGGGCCGCATCGTCAACGGTTACCCAGCGCCCG
AGGGAAAGGCTCCCTACATTGTGGGACTGTTGATCCGCACCGATGGAAGC
AACAGTGCCGCGGTTGGAGCTGGAACCATCATCGCCAGCGACTGGATTCT
GACCGCCGCTCACTGTCTGACCACCGACTACGTGGAGATCCACTATGGAT
CCAACTGGGGCTGGAACGGAGCTTTCAGGCAATCTGTCCGCCGTGACAAC
TTTATCAGCCATCCAAACTGGCCCGCTGAGGGCGGTCGTGACATCGGTCT
GATCCGCACTCCCTCCGTGGGCTTCACCGACTTGATCAACAAGGTCGCCC
TGCCAAGCTTCAGCGAGGAGAGCGACCGCTTCGTGGACACATGGTGCGTT
GCCTGCGGATGGGGCGGCATGGACAATGGCAACCTGGCCGACTGGCTGCA
GTGCATGGACGTCCAGATCATCAGCAACAGCGAGTGCGAGCAGTCCTACG
GCACCGTGGCCAGCACTGACATGTGCACGCGCCGCACCGATGGCAAATCC
TCTTGCGGAGGCGACTCTGGTGGTCCACTCGTTACCCATGACAACGCTCG
GCTAGTGGGAGTGATTACCTTTGGCTCGGTGGACTGCCACAGCGGTCCTT
CCGGCTACACCCGCGTCACCGACTACTTGGGATGGATCCGTGACAACACC
GGCATCTCCTACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCA
GGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGC
CTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAAC
GCCCGGCGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGTCA
TTACTGGATCTATCAACAGAGTCCAGCGAGCTCGATATCAATTACGCCCC
GCCCTGCCCCTCATCGCAGTACTGTTTTATTCATTAGGCATTCTGCGACT
GAGGCCATCCAAAACGCATGTGGACTGATCGCAGCGCATCAGCCTTGTCG
CCTG
UFO06432.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:36:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18179-RA | 870 | CG18179-RA | 18..822 | 8..812 | 4025 | 100 | Plus |
| CG18180-RA | 901 | CG18180-RA | 104..811 | 105..812 | 1680 | 82.7 | Plus |
| CG8329-RA | 910 | CG8329-RA | 367..767 | 390..790 | 430 | 74.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:36:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9639288..9640092 | 8..812 | 4025 | 100 | Plus |
| 3L | 28110227 | 3L | 9641116..9641823 | 105..812 | 1680 | 82.5 | Plus |
| 3L | 28110227 | 3L | 9638478..9638878 | 390..790 | 430 | 73.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:36:10 has no hits.
UFO06432.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:29:32 Download gff for
UFO06432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18179-RA | 10..830 | 1..824 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:32:51 Download gff for
UFO06432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18179-RA | 12..832 | 1..824 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:23 Download gff for
UFO06432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18179-RA | 12..832 | 1..824 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:23 Download gff for
UFO06432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9639282..9640102 | 1..824 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:32:51 Download gff for
UFO06432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9632382..9633202 | 1..824 | 98 | == | Plus |
