UFO06437.5prime Sequence
1117 bp (1018 high quality bases) assembled on 2009-08-18
> UFO06437.5prime
CAGTCGACATGCGCCGCCTTCAAACGAGCCTTTATCGACTGCTCCGTGCT
CACCACACATCCAGCAGAATGCAGCACCAAGCGAGCGAGCTGAGGACTCC
AGTGTGCGCGGTGGGCGACGAGGCTGCTCTCCAGTTGGCCCGCCAGTGCC
TGCTTGGTGGCCAAGTGATTGCCCTGCCCACCGATACCGTGTATGGCCTG
GCCTGCGATGCCAACAACGAGACAGCCATACAGCAGCTCTACGAGATTAA
GGGTCGCGATGAACACAAGCCCGTGGCCATCTGCGTTCACAACATCGATG
CGTTGCGACGCTTTGGTCAGGCTGCCCATCTCAGCGACGAGCTGCTAACT
CGTTTGCTCCCGGGCCCCCTGACCATCGTGATCGAGCGGACGTCCCAGCT
GAGCAACCGTTTCCTTAATCCCAGCACCTCCAAAATCGGCATACGCATTC
CGGACTTCAACTTCATGCGCGACCTGTGCGCCGTGTGGCAGGAGAAGCCC
CTGGCCCTGACCAGCGCCAATCGCTCCAGTGCGCCCAGCAGTCTGCAGGT
GTCCGAGTTCCGTTCCCTATGGCCCCAATTGGGCGCCGTCTTCGATGCCG
GTCGAATCGGTCTGACCGAGGAGCGACGACTGGCCTCCACGGTCATTGAC
CTGGCCACTCCTGGCTACTATGAAATAGTGCGCGCCGGCGTGGCTCTCAA
GCCGACACTCAGCCTCATGGAGGAGTTCGGCATTCGGGAGCTAAAAATGA
TGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGT
CATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATC
CTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGC
ACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGAT
CTATCACAGGAGTCCAAGCGAGCTCGATATCAATTACGCCCCGCCCTGCC
ACTCATCGCAGTACTGTGTATCATAGGCATTCTGCGACTGCAGCATCCAA
CGGCATGATGACTGATCGCAGCGCATCAGCCTGGTCGCTGCTATATTTGC
ATGGTTGAACGGGGCAG
UFO06437.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33785-RA | 1245 | CG33785-RA | 388..1131 | 9..752 | 3720 | 100 | Plus |
| CG33786-RA | 1245 | CG33786-RA | 388..1131 | 9..752 | 3720 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20642580..20643323 | 752..9 | 3720 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:03:14 has no hits.
UFO06437.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-05 15:29:28 Download gff for
UFO06437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33785-RA | 375..1126 | 1..752 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:00:36 Download gff for
UFO06437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33785-RA | 380..1131 | 1..752 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:50 Download gff for
UFO06437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33786-RA | 380..1131 | 1..752 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:50 Download gff for
UFO06437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20642580..20643329 | 1..752 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:00:36 Download gff for
UFO06437.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16530085..16530834 | 1..752 | 99 | | Minus |
