UFO06452.5prime Sequence
1101 bp (1020 high quality bases) assembled on 2009-08-18
> UFO06452.5prime
CAGTCGACATGTACAGTAGCAGCTTGCTGCCGGATCCGGCTGTCTATCAG
CCGGACACCCTGGACCTGAACACGGATGGAAAGGCGGCGGATTACTGGTT
CAACTGCTTCCGCGACATGGTGGCCAAGTTCGCGAAGGTGGCGGCCAAGT
CACAGGAGGAGGATCACACGGCCACCCAGCGGGCGGAGCAGTTCCAGGCG
GCGTATCTGCAGCGGCTGGAGGAGCACCAGCGTAATGTGCCAGTCAACAA
GGGCAAGGTGATTCTAGGCACCAGTGAGCTTCTCAAGCTAAACGAAACCC
TGTTGCGCCGCTACGGATTTACAGATCCCTGGCTGAGACAAAAGAGGCTG
GAAAATGCATCGGCTGTTGCCCGCCTGAAGCAGCGTCTGCAGGAATTGGA
TGCCCTGGCGGATGAGGACACAAGGTGGACGGAGCTGGTACGCGGTGTCC
TCGCCGGCAACATGTTTGACTGGGGCGCACAGGCCATATCTAACATACTG
GAGCAGGACAGCAATTTCGGACTTCATTCAGCCCTGGATCGCATTGAGAA
GCGACCCTGGTTGCTTGACAACCTGGACAGCTGGTTGAATCGCCTCAAGG
GCGAGCCACACAAGTGCGCCGTGGTCTTTGTGGACAACAGCGGCGTGGAT
GTGGTTCTGGGTGTGCTTCCCTTTGTCCGTGGACTGCTGAAACGTGGCAC
CAAGGTGCTGCTCTGCGCCAACAGTGAACCTGCTCTAAATGATGTGACCA
GCGAGGAGCTGAAATCCTTGCTGGACGACTGCTCGCGCGAGTGTGAGGTC
CTGGAGCAGGCCTGGTCAAAGGGACAACTACTGGTCTATGCAAATGGACA
GACTGGTCCCTGCCTGGATATGCGCACTCTCCCCAAGGAGCTGTGCGACG
CCATCGCGCCATGAGACTGACTGCTTGTGATGAGGCATGGGACGCGCCCT
GCACACAATCTGATGCCCGCTCGGCTGCAGACCTCAGTGCGTGATAAAAA
ACAATGCTGCAGTACTGGGCGCAGAATTTGTTCGCGTCTCTGCAGTCGAC
GGCTGCCAGGCAGCTTCCAACATTCATGGCGCGGCCAGTATGACTAACTA
A
UFO06452.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:53:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5828-RB | 1935 | CG5828-RB | 131..1140 | 9..1004 | 4710 | 98.6 | Plus |
| CG5828-RA | 1428 | CG5828-RA | 95..1104 | 9..1004 | 4710 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:53:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5094106..5095060 | 9..958 | 4535 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:53:48 has no hits.
UFO06452.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:38:40 Download gff for
UFO06452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5828-RA | 79..1102 | 1..1009 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:48 Download gff for
UFO06452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5828-RA | 88..1111 | 1..1009 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:17 Download gff for
UFO06452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5828-RA | 88..1111 | 1..1009 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:17 Download gff for
UFO06452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5094099..5095122 | 1..1009 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:48 Download gff for
UFO06452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5094099..5095122 | 1..1009 | 98 | | Plus |
