UFO06456.5prime Sequence
1074 bp (967 high quality bases) assembled on 2009-08-18
> UFO06456.5prime
CAGTCGACATGAGAATAAGAACTAGCCTTTTGGCAGTTGTACTGCTGGCC
ACCGCCTCCTTGGCCGAGGAATCCAACTGGGGAAATGAGTGGGCGCCCAT
GGAGGATGCCATGCCCAGTCGCCGATCTGTCGATACCAAGCCCGCCGAAC
AAGCTGACATTCAGGGACGTTACCTCGTCCACGAGTCCATCCAGAGCAAC
AGCACCACCCAGATTGACGAGGTCATCGAGCAGCTGATCAACTCCCGCCG
TGAGGGTCGTAATCTGGGGGAATACGATGCCGTCTATGCTGATGGCAATA
TCGATCAGGCTCTGCAGCAGGGAAACGATATGCAGGCCCGCAATCTTATC
CGGGATAAGCTGTGTGGATTGGGACTGATGAGCTGCGATGTGGAGGAGAA
GCGTCCCTTCTACTCGACCATCTATGCCCAGGGTCCCCCACCACCATCTG
GTTTCAGCGGTGGTCCCTATGGTCCGGCTAAGCCCATGCCCCCACCAAGC
TACTTCAGTGGTCGTCCACCAATGGGTGGACCTCCTGGATCTTACGGACC
TCCGCCAAGCTCCCTGAACTCCTTTGGACCTCCGCCCAGCTCCGTGAACT
CCTTTGGACCGCCAAGGAAGGTGGGATACGAGGGACCATACAAGCCAATG
TCTGGACCTTACAGGCCATCTGGACCCGGTGGCTACCTGGAGCATCCTCC
ACCATCCGCCATTGACGGTTCATCCGACGGTATCACCTACACGAAGCCAC
CACCCGGAGCCCTGATCTATGACAGCAAGCCACCAGGACCCATCTACACC
GGAGGTCCTTCTCTGGGAGCTGGACCCGTTTTTACTGGTGCTTCGAATGG
AGTTCCTCCATACAACTACGAGAACCCCGAGGGTGGCATCCACGTGCAAG
CTCTGCTCCAATGGTTTCTACTCGCAGCAGTCTTCAGCTTCTTCTGCTCG
GCCACATCCTCCAGCACCAAGTTGGTGGTTGGAGCACCGCTCGATGTCTG
CAGCAACATGTGCATCATCATTATCACATGTTGAGGTGCGAGGGAGCAAG
TTCATGTGCCATCATCGGAACTGG
UFO06456.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4998-RB | 4192 | CG4998-RB | 155..1202 | 9..1049 | 5005 | 99 | Plus |
| CG4998-RA | 3310 | CG4998-RA | 155..1202 | 9..1049 | 5005 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16340444..16341466 | 9..1027 | 4855 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:17:29 has no hits.
UFO06456.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:38:44 Download gff for
UFO06456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4998-RB | 152..1212 | 1..1053 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:38 Download gff for
UFO06456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4998-RA | 148..1208 | 1..1053 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:53 Download gff for
UFO06456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4998-RA | 148..1208 | 1..1053 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:53 Download gff for
UFO06456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16340437..16341497 | 1..1053 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:38 Download gff for
UFO06456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16333537..16334597 | 1..1053 | 98 | | Plus |
