Clone UFO06462 Report

Search the DGRC for UFO06462

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:64
Well:62
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO06462.5prime Sequence

1110 bp (1014 high quality bases) assembled on 2009-08-18

> UFO06462.5prime
CAGTCGACATGGCACCAATGCCCCGAATTCAGTTACCCAATGGAAATTCT
TCCATAAAGGCTAGCACAAATGATTTTCTCTTTGCGGAAACAATGTCCGG
CGGCAGTAGTCCCACCCCCAGCAGTCCGCCATCCAGTACAGCAGGCGTTG
CCAAATCTCAGTGTTCTTCCCTTTCGGATGGCGAATCCTTTGAGGGATAT
GGCGAAAATGAGTATCCCACCCAACTTCGCGAAGCCCGCAGCTCCAATTC
CAATGGGAGCCATAATATGAGCAATCATATTAACAATAATTCTAATATCA
GCGTGGGCAACAACAGTGGACACAACCACAGTGGACACTCGAACGATGGA
AATAACAACCTAAATGGCAGCACTGGCGTCGAACTCGATTTGGCTCCACA
CGTCGGCTCATCAACACCTCAAGATGATGACGAACTAAACATAATGCCCC
GGGATAATTGGGCCAGGCGCAGTCTGCGACGAACTCCCACCAGTTCCGGC
CGCAGGCAAATTAGTTCAAATGCCTTAGCCAGCCAACTCTATAGATCATC
GAGCTTTAACTCATCGGGCCGTAGCTCCAACTGTGATACAACAGAAGACA
TGTACAGCGACATAAGCTTGGAGAATCGTCATGACTACGATTATAGGCTG
GAACTGCTGCAGCGCAAGGTGGACGATCTGTCAGATACACAGAATATAGC
TGAGGATCGGACAACCCGCACCAAGACCGAATATGCAGTCCTTCAGGCGC
GTTATCACATGCTCGAAGAGCAGTACCGAGAGTCGGAACTGCGTGCCGAG
GAGCGTTTGGCAGAGGAGCAGAAGCGGCACCGCGAGATTTTGGCCCGCGT
GGAGCGTGAAGCCTCGCTGCAGAACGAGAACTGCCAGATGAGATCCGTGC
CACCGAGATCGAGGCACGGCACTGCGGGAAGAAGCCGCCCGACTGCGTGT
CTGTGTGACAGCAGCCAATGACCTCCATCGCACGAGGACAGTGGAGCTGG
CGCGCGACCAAATCGGCGTCTGCACAGGAGCACGAGGAGCAGCACAGGCA
CTGCCCGCCACGAACAGGAAAGAGTCCCCGAGGGACTGATGCTGACCTGA
CCGGGACTTG

UFO06462.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:07:56
Subject Length Description Subject Range Query Range Score Percent Strand
nuf-RL 2735 CG33991-RL 741..1843 7..1094 5095 98.4 Plus
nuf-RA 2696 CG33991-RA 741..1843 7..1094 5095 98.4 Plus
nuf-RC 3446 CG33991-RC 741..1843 7..1094 5095 98.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:07:54
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14200162..14200447 139..424 1430 100 Plus
3L 28110227 3L 14230654..14230954 781..1069 905 96 Plus
3L 28110227 3L 14230175..14230310 647..782 680 100 Plus
3L 28110227 3L 14199966..14200100 7..141 660 99.3 Plus
3L 28110227 3L 14213087..14213203 531..647 585 100 Plus
3L 28110227 3L 14200739..14200807 425..493 345 100 Plus
3L 28110227 3L 14212191..14212232 491..532 210 100 Plus
Blast to na_te.dros performed on 2014-11-28 22:07:55 has no hits.

UFO06462.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:38:49 Download gff for UFO06462.5prime
Subject Subject Range Query Range Percent Splice Strand
nuf-RA 731..1839 1..1094 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:31 Download gff for UFO06462.5prime
Subject Subject Range Query Range Percent Splice Strand
nuf-RC 735..1843 1..1094 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:51 Download gff for UFO06462.5prime
Subject Subject Range Query Range Percent Splice Strand
nuf-RC 735..1843 1..1094 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:51 Download gff for UFO06462.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 14230656..14230982 783..1094 94   Plus
3L 14230176..14230310 648..782 100 -> Plus
3L 14199960..14200100 1..141 96 -> Plus
3L 14200165..14200447 142..424 100 -> Plus
3L 14200739..14200807 425..493 100 -> Plus
3L 14212194..14212232 494..532 100 -> Plus
3L 14213089..14213203 533..647 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:31 Download gff for UFO06462.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14193060..14193200 1..141 96 -> Plus
arm_3L 14193265..14193547 142..424 100 -> Plus
arm_3L 14193839..14193907 425..493 100 -> Plus
arm_3L 14205294..14205332 494..532 100 -> Plus
arm_3L 14206189..14206303 533..647 100 -> Plus
arm_3L 14223276..14223410 648..782 100 -> Plus
arm_3L 14223756..14224082 783..1094 94   Plus