UFO06464.5prime Sequence
1119 bp (1003 high quality bases) assembled on 2009-08-18
> UFO06464.5prime
CAGTCGACATGAGCAGCAATTCCAAGTCGAGATGGAGGAGTTTGAAACTA
GTTTATCAATTTGAAAGTAGCAACGATTTCGGAACAGAAAGAGATGCAGA
AGTCGACACCGGAGAAGGAGAGAATTCAAACCATGAGACTGAAGTGCATC
AGCCAGAGCAAGAGTCCACCGAGGATGAGCGATTCCAATGCCACGTCAAG
AATGAGTCCATCAACGAAGATCTCTCAGAGGAAGAAGATTACAGCGAACT
GAGCACATTAAGACTGGAGGACATTGAAGAGAATGTCCTCGAAGGTACTC
CTCGAATCGTTGAGATGCAGGATGACAGCAAAGTGCAACCAAACCACAAA
TACGTCAATGTAAAAATGTTTATTTTATATACATATAAAGCAAGCTTTCT
AGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATC
ATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTA
GTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCT
GAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGA
GTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCA
GTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAA
CGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGC
GTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATT
GGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGA
CGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTCAC
CGTAACACGCACATCTGCGAATATATGTGTAGAACTGCCGGAAATCGTCG
TGTATTCACTCCAGAGCGATGAAACGTTCAGTTTGCTCATGGAAAACCGG
TGTAACAGGGTGAAACTATCCCATATCACCAGCTCACGTCTCATGCATAC
GAGTCGGATGACATCTCAGCGGCAGAATGTGAATAAGGCCGATAACTGGC
CTATTTTCTTACGGCTTCA
UFO06464.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:05:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15345-RA | 1085 | CG15345-RA | 401..781 | 9..389 | 1905 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:05:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8397461..8397841 | 389..9 | 1905 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 19:05:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bari1 | 1728 | Bari1 DMBARI1 1728bp AKA(S55767) Derived from X67681 (g7640) (Rel. 36, Last updated, Version 6). | 1372..1462 | 416..327 | 119 | 63.4 | Minus |
UFO06464.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:38:51 Download gff for
UFO06464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15345-RA | 358..748 | 1..394 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:04 Download gff for
UFO06464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15345-RA | 395..785 | 1..394 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:39 Download gff for
UFO06464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15345-RA | 395..785 | 1..394 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:39 Download gff for
UFO06464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8397461..8397845 | 1..389 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:04 Download gff for
UFO06464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8291494..8291878 | 1..389 | 98 | | Minus |
