UFO06466.5prime Sequence
473 bp (-98 high quality bases) assembled on 2009-08-18
> UFO06466.5prime
CAGTCGACATGGAGGAGGACCAACAATTTACTGCGGACCCTGAAATGGTG
CTGGTTGCGGCCCAGAAGATCCTGCCAGGATTCCGAGAGAGGTGAAAGTT
AAACTGCAAAGGCAACTAAACACACTGGGCTACTAACCGCAAATCCTGCT
CGAAGGGGCCAAGCACCAAGATCATAATAATTCGAATGGCCTTCTCCAGT
AGGTGCCCGACGTGATTGGCAAGGGCTGGGAACTGGTGAAAAACTGCCAC
TCCGTTAGCTGAAACAACGTTAACCGGTGGCTGGAGCTCATGAAAAGTTC
GCAACTCGCTGATCTCTGCGAATTCTAAGCAGCCGTCGTTGTGAACTCCA
TAATCCAAAATGACACAAAGCCATCGCCAACAGAACTGAACGGCATTGAC
TTGAATGAGGCCTACAGTTTTCTGGAACACGCTTTGATGGGCCAGCCGCA
TAAGAAGATGATCGATGCGACCA
UFO06466.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:33:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6685-RB | 1534 | CG6685-RB | 75..489 | 59..473 | 1580 | 92 | Plus |
| CG6685-RA | 929 | CG6685-RA | 75..489 | 59..473 | 1580 | 92 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:33:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9967834..9968041 | 405..198 | 830 | 93.3 | Minus |
| 3L | 28110227 | 3L | 9968105..9968243 | 197..59 | 485 | 89.9 | Minus |
| 3L | 28110227 | 3L | 9967713..9967780 | 473..406 | 265 | 92.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:33:03 has no hits.
UFO06466.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed on 2010-08-02 18:38:54 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 22:32:28 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 20:19:23 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:23 Download gff for
UFO06466.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9967714..9967780 | 406..472 | 92 | <- | Minus |
| 3L | 9967834..9968041 | 198..405 | 93 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:28 Download gff for
UFO06466.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9960814..9960880 | 406..472 | 92 | <- | Minus |
| arm_3L | 9960934..9961141 | 198..405 | 93 | <- | Minus |
